RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 C12orf54Q6X4T0 127 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 ABHD3Q8WU67 409 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.22□□□□□ -0.29
SCN3B-201ENST00000299333 MORN4Q8NDC4 146 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 OR1F12Q8NHA8 337 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 MFSD2BA6NFX1 497 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 SIGLEC5O15389 551 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 EPPINO95925 133 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 SIGLEC14Q08ET2 396 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 CEACAM16Q2WEN9 425 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 TMEM255AQ5JRV8 349 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 MRPL37Q9BZE1 423 aaKnown RBP13.22□□□□□ -0.29
SCN3B-201ENST00000299333 FAM206AQ9NX38 181 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 M0QZ24 198 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 ADIPOQQ15848 244 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 COX19Q49B96 90 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 VASH2Q86V25 355 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 MUC15Q8N387 334 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 LRRC75AQ8NAA5 344 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 FRG2CA6NGY1 282 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
SCN3B-201ENST00000299333 PNLIPRP2P54317 469 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 HES3Q5TGS1 186 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 SSX8Q7RTT4 187 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 RNF133Q8WVZ7 376 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 TAAR3PQ9P1P4 343 aa13.21□□□□□ -0.29
SCN3B-201ENST00000299333 OR2W5A6NFC9 320 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 PAGE4O60829 102 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 GOSR1O95249 250 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 SLC25A1P53007 311 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 DLX1P56177 255 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 FAHD2BQ6P2I3 314 aaPredicted RBP13.21□□□□□ -0.3
SCN3B-201ENST00000299333 LURAP1LQ8IV03 231 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 PTP4A1Q93096 173 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 OR2A5Q96R48 311 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 IGHV3-43A0A0B4J1X8 118 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 GSTZ1O43708 216 aaPredicted RBP13.21□□□□□ -0.3
SCN3B-201ENST00000299333 P01737 135 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 IGHV3-43DP0DP04 118 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 GUCA2BQ16661 112 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 FBXO46Q6PJ61 603 aaPredicted RBP13.21□□□□□ -0.3
SCN3B-201ENST00000299333 RTL10Q7L3V2 364 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 LYG1Q8N1E2 194 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 KCNE4Q8WWG9 221 aa13.21□□□□□ -0.3
SCN3B-201ENST00000299333 SHISA8B8ZZ34 492 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 CHST1O43916 411 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 PSG5Q15238 335 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 RTN4RL1Q86UN2 441 aaPredicted RBP13.2□□□□□ -0.3
SCN3B-201ENST00000299333 PDPNQ86YL7 162 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 WFDC8Q8IUA0 241 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 MIXL1Q9H2W2 232 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 PROCRQ9UNN8 238 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 A0A0B4J2E0 115 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 A0A1B0GX12 115 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 METTL12A8MUP2 240 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 IZUMO4Q1ZYL8 232 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 OR1B1Q8NGR6 318 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 APOBEC3DQ96AK3 386 aaPredicted RBP13.2□□□□□ -0.3
SCN3B-201ENST00000299333 SARGQ9BW04 601 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 UBE2ZQ9H832 354 aaPredicted RBP13.2□□□□□ -0.3
SCN3B-201ENST00000299333 TMEM167BQ9NRX6 74 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 NPTNQ9Y639 398 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 RER1O15258 196 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 EDIL3O43854 480 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 SCAND1P57086 179 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 LYZP61626 148 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 OR4P4Q8NGL7 312 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 SFRP2Q96HF1 295 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 ZNF275Q9NSD4 429 aaPredicted RBP13.2□□□□□ -0.3
SCN3B-201ENST00000299333 UQCR10Q9UDW1 63 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 ZNF391Q9UJN7 358 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 HS3ST3A1Q9Y663 406 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 ANKRD34CP0C6C1 535 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 ANKRD55Q3KP44 614 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 TBC1D26Q86UD7 250 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 WBP2Q969T9 261 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 ANAPC13Q9BS18 74 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 PDFQ9HBH1 243 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 PARP11Q9NR21 331 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 KCNK7Q9Y2U2 307 aa13.2□□□□□ -0.3
SCN3B-201ENST00000299333 A0A0A6YYD5 115 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 PLA2G10O15496 165 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 IGFBP7Q16270 282 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 MSRB3Q8IXL7 192 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 ZADH2Q8N4Q0 377 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 FLYWCH2Q96CP2 140 aaKnown RBP13.19□□□□□ -0.3
SCN3B-201ENST00000299333 FOXB1Q99853 325 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 ALKBH7Q9BT30 221 aaPredicted RBP13.19□□□□□ -0.3
SCN3B-201ENST00000299333 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 ZNF137PP52743 207 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 JMJD6Q6NYC1 403 aaPredicted RBP13.19□□□□□ -0.3
SCN3B-201ENST00000299333 MMP25Q9NPA2 562 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 MARCH5Q9NX47 278 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 CTDSPLO15194 276 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 PRR35P0CG20 571 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 FAM157CP0CG43 387 aa13.19□□□□□ -0.3
SCN3B-201ENST00000299333 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms