RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 POLDIP2Q9Y2S7 368 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 J3QT63 122 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 TMPRSS2O15393 492 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 ACAA1P09110 424 aaPredicted RBP17.64■□□□□ 0.41
SMCO4-201ENST00000298966 GTF2F2P13984 249 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 CPT2P23786 658 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 RPS27AP62979 156 aaKnown RBP17.64■□□□□ 0.41
SMCO4-201ENST00000298966 DEFA6Q01524 100 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 UNC119Q13432 240 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 TRIM16LQ309B1 348 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 SLC22A6Q4U2R8 563 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 Q6ZNX1 250 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 RNF144BQ7Z419 303 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 Q8IYB0 196 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 CENPSQ8N2Z9 138 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 DTX3Q8N9I9 347 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 C19orf18Q8NEA5 215 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 OR56B1Q8NGI3 324 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 TRIM63Q969Q1 353 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 DIRC2Q96SL1 478 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 TBC1D24Q9ULP9 559 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 WNK2Q9Y3S1 2297 aa17.64■□□□□ 0.41
SMCO4-201ENST00000298966 TRAV20A0A0B4J274 112 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 GABARAPH6UMI1 98 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 CRTAPO75718 401 aaPredicted RBP17.63■□□□□ 0.41
SMCO4-201ENST00000298966 MPIG6BO95866 241 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 MGMTP16455 207 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 HAAOP46952 286 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 ELP2Q6IA86 826 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 SHISA2Q6UWI4 295 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 FAM89BQ8N5H3 189 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 CELF2-AS1Q8N7Q2 184 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 OR5D18Q8NGL1 313 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 THAP7Q9BT49 309 aaPredicted RBP17.63■□□□□ 0.41
SMCO4-201ENST00000298966 ZNF747Q9BV97 191 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 OR51I2Q9H344 312 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 ELL3Q9HB65 397 aaPredicted RBP17.63■□□□□ 0.41
SMCO4-201ENST00000298966 TREM2Q9NZC2 230 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 DUSP13Q9UII6 198 aa17.63■□□□□ 0.41
SMCO4-201ENST00000298966 MRPS7Q9Y2R9 242 aaKnown RBP17.63■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A10PA6NDY2 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A18PA6NE21 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A16PA6NEW6 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A20PA6NIJ5 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A8PA6NJQ4 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A7PA6NKC0 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A22PA8MWA6 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A12PA8MX19 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A5PA8MXJ8 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A23PA8MXZ1 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 M0R233 179 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 SULT1C2O00338 296 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 TPD52L2O43399 206 aaKnown RBP17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A15PP0C7V4 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A13PP0C7W8 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A14PP0C7W9 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 FAM90A24PP0C7X0 464 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 ALKBH6Q3KRA9 238 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 IZUMO1Q8IYV9 350 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 RDH5Q92781 318 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 YIPF5Q969M3 257 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 LPAR5Q9H1C0 372 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 MS4A5Q9H3V2 200 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 SCPEP1Q9HB40 452 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 ZDHHC8Q9ULC8 765 aa17.62■□□□□ 0.41
SMCO4-201ENST00000298966 TRAPPC2LH3BP13 241 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 RAB27BO00194 218 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 PTBP3O95758 552 aaKnown RBP17.61■□□□□ 0.41
SMCO4-201ENST00000298966 SERPINA2P20848 420 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 CD200P41217 278 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 INPP1P49441 399 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 SSBP1Q04837 148 aaKnown RBP17.61■□□□□ 0.41
SMCO4-201ENST00000298966 NHLRC3Q5JS37 347 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 OR10K2Q6IF99 312 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 SLC25A26Q70HW3 274 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 LINC00596Q86U02 117 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 CALHM1Q8IU99 346 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 DEDD2Q8WXF8 326 aa17.61■□□□□ 0.41
SMCO4-201ENST00000298966 FGF23Q9GZV9 251 aaPredicted RBP17.61■□□□□ 0.41
SMCO4-201ENST00000298966 LOC105371242A0A075B767 164 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 HTR3BO95264 441 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 ADH4P08319 380 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 GSTP1P09211 210 aaKnown RBP17.6■□□□□ 0.41
SMCO4-201ENST00000298966 TNFSF4P23510 183 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 COL8A2P25067 703 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 TMEM33P57088 247 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 DGCR2P98153 550 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 FOXL1Q12952 345 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 DMRTC1Q5HYR2 192 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 TMEM255AQ5JRV8 349 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 HAGHLQ6PII5 290 aaPredicted RBP17.6■□□□□ 0.41
SMCO4-201ENST00000298966 C1QL2Q7Z5L3 287 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 OSR2Q8N2R0 312 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 OR10R2Q8NGX6 335 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 FCAMRQ8WWV6 532 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 MRPL37Q9BZE1 423 aaKnown RBP17.6■□□□□ 0.41
SMCO4-201ENST00000298966 TLNRD1Q9H1K6 362 aa17.6■□□□□ 0.41
SMCO4-201ENST00000298966 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.6■□□□□ 0.41
SMCO4-201ENST00000298966 RBMX2Q9Y388 322 aaKnown RBP17.6■□□□□ 0.41
SMCO4-201ENST00000298966 TRAV18A0A075B6X5 111 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms