RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TMEM222Q9H0R3 208 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 GPR173Q9NS66 373 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 GAR1Q9NY12 217 aaKnown RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 UNC80Q8N2C7 3258 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 MPPED1O15442 326 aa16.62■□□□□ 0.25
TRA2A-201ENST00000297071 PDCD6O75340 191 aa16.62■□□□□ 0.25
TRA2A-201ENST00000297071 NKX2-1P43699 371 aaPredicted RBP16.62■□□□□ 0.25
TRA2A-201ENST00000297071 SLC22A25Q6T423 547 aa16.62■□□□□ 0.25
TRA2A-201ENST00000297071 CLEC9AQ6UXN8 241 aa16.62■□□□□ 0.25
TRA2A-201ENST00000297071 TSTD1Q8NFU3 115 aa16.62■□□□□ 0.25
TRA2A-201ENST00000297071 RAB39BQ96DA2 213 aa16.62■□□□□ 0.25
TRA2A-201ENST00000297071 FAM86C1Q9NVL1 165 aa16.62■□□□□ 0.25
TRA2A-201ENST00000297071 TMEM242Q9NWH2 141 aa16.62■□□□□ 0.25
TRA2A-201ENST00000297071 C19orf25Q9UFG5 118 aaPredicted RBP16.62■□□□□ 0.25
TRA2A-201ENST00000297071 PUS1Q9Y606 427 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRA2A-201ENST00000297071 UNC13CQ8NB66 2214 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 C3orf85A0A1B0GTC6 90 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 TP53I11O14683 189 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 BCAT2O15382 392 aaPredicted RBP16.61■□□□□ 0.25
TRA2A-201ENST00000297071 PHF1O43189 567 aaPredicted RBP16.61■□□□□ 0.25
TRA2A-201ENST00000297071 CD63P08962 238 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 RPS10P46783 165 aaKnown RBP16.61■□□□□ 0.25
TRA2A-201ENST00000297071 RRADP55042 308 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 ELOBQ15370 118 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 PHYHD1Q5SRE7 291 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 Q6ZS52 159 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 SHISA6Q6ZSJ9 500 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 SLC35G3Q8N808 338 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 DKKL1Q9UK85 242 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 EML6Q6ZMW3 1958 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 DNPH1O43598 174 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 SCAF4O95104 1147 aaKnown RBP16.61■□□□□ 0.25
TRA2A-201ENST00000297071 OPRM1P35372 400 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 GLIPR1P48060 266 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 UBE2KP61086 200 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 PHLDA2Q53GA4 152 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 FAM69BQ5VUD6 431 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 MAML2Q8IZL2 1156 aaPredicted RBP16.61■□□□□ 0.25
TRA2A-201ENST00000297071 Q8NFD4 153 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 OR10AD1Q8NGE0 317 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 OR5L1Q8NGL2 311 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 IL22RA2Q969J5 263 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 BORCS8Q96FH0 119 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 RARRES2Q99969 163 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 RYDENQ9NUL5 291 aaKnown RBP16.61■□□□□ 0.25
TRA2A-201ENST00000297071 PLEK2Q9NYT0 353 aa16.61■□□□□ 0.25
TRA2A-201ENST00000297071 KNL1Q8NG31 2342 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 IGSF23A1L1A6 192 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 CST2P09228 141 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 TAGLN2P37802 199 aaKnown RBP16.6■□□□□ 0.25
TRA2A-201ENST00000297071 FXYD4P59646 89 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 TLE4Q04727 773 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 FOXO1Q12778 655 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 MALLQ13021 153 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 ICAM4Q14773 271 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 ACSF3Q4G176 576 aaPredicted RBP16.6■□□□□ 0.25
TRA2A-201ENST00000297071 NCMAPQ5T1S8 102 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 WDR5BQ86VZ2 330 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 C20orf196Q8IYI0 205 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 TMEM252Q8N6L7 170 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 DOK5Q9P104 306 aa16.6■□□□□ 0.25
TRA2A-201ENST00000297071 TNRC6BQ9UPQ9 1833 aaKnown RBP16.59■□□□□ 0.25
TRA2A-201ENST00000297071 IGKV1-27A0A075B6S5 117 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 TMEM265A0A087WTH1 108 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 IFITM10A6NMD0 228 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 SYNGR3O43761 229 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 PPYP01298 95 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 FUT6P51993 359 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 PNRC1Q12796 327 aaPredicted RBP16.59■□□□□ 0.25
TRA2A-201ENST00000297071 SNAI3Q3KNW1 292 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 PYY3Q5JQD4 70 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 ZNF429Q86V71 674 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 GPR137CQ8N3F9 429 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 AKR7LQ8NHP1 331 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 RLN3Q8WXF3 142 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 REEP6Q96HR9 211 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 TP53RKQ96S44 253 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 FAM24AA6NFZ4 105 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 ZNF724A8MTY0 619 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 NPIPA2E9PIF3 369 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 NPIPA3F8WFD2 350 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 OR2J2O76002 312 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 AADACP22760 399 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 ITGA3P26006 1051 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 SSTP61278 116 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 ID3Q02535 119 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 IL24Q13007 206 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 DPPA2Q7Z7J5 298 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 RASL10BQ96S79 203 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 NIPSNAP3BQ9BS92 247 aa16.59■□□□□ 0.25
TRA2A-201ENST00000297071 SF3B5Q9BWJ5 86 aaKnown RBP16.59■□□□□ 0.25
TRA2A-201ENST00000297071 NKX2-6A6NCS4 301 aa16.58■□□□□ 0.24
TRA2A-201ENST00000297071 DBHP09172 617 aa16.58■□□□□ 0.24
TRA2A-201ENST00000297071 TCN2P20062 427 aa16.58■□□□□ 0.24
TRA2A-201ENST00000297071 FUT3P21217 361 aa16.58■□□□□ 0.24
TRA2A-201ENST00000297071 RND2P52198 227 aa16.58■□□□□ 0.24
TRA2A-201ENST00000297071 CCL20P78556 96 aa16.58■□□□□ 0.24
TRA2A-201ENST00000297071 DLK1P80370 383 aa16.58■□□□□ 0.24
TRA2A-201ENST00000297071 ZNF385CQ66K41 422 aaPredicted RBP16.58■□□□□ 0.24
TRA2A-201ENST00000297071 SELENOHQ8IZQ5 122 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms