RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 GVQW1Q8N7I0 195 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 FAM122AQ96E09 287 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 CYYR1Q96J86 154 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 OCSTAMPQ9BR26 566 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 TMEM8BA6NDV4 472 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 IFNA4P05014 189 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 ACAA1P09110 424 aaPredicted RBP13.27□□□□□ -0.28
LSM6-201ENST00000296581 KITLGP21583 273 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 TAF9Q16594 264 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 SEZ6L2Q6UXD5 910 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 NLRC3Q7RTR2 1065 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 MKXQ8IYA7 352 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 ST6GALNAC3Q8NDV1 305 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 RTL8AQ9BWD3 113 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 PKIBQ9C010 78 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 OR51I2Q9H344 312 aa13.27□□□□□ -0.28
LSM6-201ENST00000296581 SHANK1Q9Y566 2161 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 HEATR1Q9H583 2144 aaKnown RBP13.27□□□□□ -0.29
LSM6-201ENST00000296581 CHD8Q9HCK8 2581 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 EIF3GO75821 320 aaKnown RBP eCLIP13.27□□□□□ -0.29
LSM6-201ENST00000296581 SFTPCP11686 197 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 MPZP25189 248 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 NPBWR2P48146 333 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 RBM11P57052 281 aaKnown RBP13.27□□□□□ -0.29
LSM6-201ENST00000296581 ESPL1Q14674 2120 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 PIGYQ3MUY2 71 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 FAM76BQ5HYJ3 339 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 MBNL2Q5VZF2 373 aaKnown RBP13.27□□□□□ -0.29
LSM6-201ENST00000296581 OR4S1Q8NGB4 309 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 RND1Q92730 232 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 MICU1Q9BPX6 476 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 NPDC1Q9NQX5 325 aaPredicted RBP13.27□□□□□ -0.29
LSM6-201ENST00000296581 ST3GAL6Q9Y274 331 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 MEMO1Q9Y316 297 aa13.27□□□□□ -0.29
LSM6-201ENST00000296581 M0R1B8 84 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 ZNF735P0CB33 412 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 SMIM6P0DI80 62 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 TBPP20226 339 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 CHATP28329 748 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 IL24Q13007 206 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 ARFRP1Q13795 201 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 MEF2DQ14814 521 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 OPCMLQ14982 345 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 ZNF718Q3SXZ3 478 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 C6orf201Q7Z4U5 140 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 UXS1Q8NBZ7 420 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 OR8G5Q8NG78 346 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 OR51S1Q8NGJ8 323 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 SLAMF9Q96A28 289 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 LRRC46Q96FV0 321 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 OR10A4Q9H209 315 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 OR51J1Q9H342 316 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 DLL4Q9NR61 685 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 MTCH1Q9NZJ7 389 aa13.26□□□□□ -0.29
LSM6-201ENST00000296581 MEIKINA0A087WXM9 373 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 MED19A0JLT2 244 aaPredicted RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A10PA6NDY2 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A18PA6NE21 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A16PA6NEW6 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A20PA6NIJ5 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A8PA6NJQ4 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A7PA6NKC0 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A22PA8MWA6 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A12PA8MX19 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A5PA8MXJ8 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A23PA8MXZ1 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 C16orf97H3BN30 126 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 M0QYG6 137 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 GEMIN2O14893 280 aaKnown RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A15PP0C7V4 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A13PP0C7W8 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A14PP0C7W9 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FAM90A24PP0C7X0 464 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 BCL3P20749 454 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 MECP2P51608 486 aaKnown RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 FGF12P61328 243 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 DAZAP2Q15038 168 aaPredicted RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 RBMS2Q15434 407 aaKnown RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 HAGHLQ6PII5 290 aaPredicted RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 KDF1Q8NAX2 398 aaPredicted RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 SFT2D1Q8WV19 159 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 PLEKHJ1Q9NW61 149 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 NKIRAS2Q9NYR9 191 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 SCP2D1Q9UJQ7 156 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 FLVCR2Q9UPI3 526 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 TRBV23-1A0A0A0MS06 115 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 TRGV8A0A0C4DH27 118 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 SYNGR1O43759 233 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 RGS11O94810 467 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 PLA2G5P39877 138 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 CA7P43166 264 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 CASP6P55212 293 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 OR52W1Q6IF63 320 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 C22orf34Q6ZV56 151 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 WDR86Q86TI4 376 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 ZNF565Q8N9K5 539 aa13.25□□□□□ -0.29
LSM6-201ENST00000296581 ADAT1Q9BUB4 502 aaKnown RBP13.25□□□□□ -0.29
LSM6-201ENST00000296581 ZNF581Q9P0T4 197 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms