RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PRSS54Q6PEW0 395 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 HAGHLQ6PII5 290 aaPredicted RBP10.1□□□□□ -0.79
RHO-201ENST00000296271 C20orf204Q6ZNR8 217 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 MCEMP1Q8IX19 187 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 BPIFCQ8NFQ6 507 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 UBALD1Q8TB05 177 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 RTN4IP1Q8WWV3 396 aaPredicted RBP10.1□□□□□ -0.79
RHO-201ENST00000296271 WDYHV1Q96HA8 205 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 NARS2Q96I59 477 aaKnown RBP10.1□□□□□ -0.79
RHO-201ENST00000296271 LINC00470Q9BZP3 86 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 SLC25A32Q9H2D1 315 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 RGCCQ9H4X1 137 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 NECAP2Q9NVZ3 263 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 RRP8O43159 456 aaKnown RBP10.1□□□□□ -0.79
RHO-201ENST00000296271 CTSDP07339 412 aaPredicted RBP10.1□□□□□ -0.79
RHO-201ENST00000296271 MALLQ13021 153 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 CLN3Q13286 438 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 ZNF766Q5HY98 468 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 DHRS11Q6UWP2 260 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 MDP1Q86V88 176 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 SGPP2Q8IWX5 399 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 EXTL1Q92935 676 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 ADAT1Q9BUB4 502 aaKnown RBP10.1□□□□□ -0.79
RHO-201ENST00000296271 MED9Q9NWA0 146 aa10.1□□□□□ -0.79
RHO-201ENST00000296271 CACNA1DQ01668 2161 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 RPL36A-HNRNPH2H7BZ11 118 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 TSPAN4O14817 238 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 FUT3P21217 361 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 CA6P23280 308 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 ASCL1P50553 236 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 PLEKHN1Q494U1 663 aaPredicted RBP10.09□□□□□ -0.79
RHO-201ENST00000296271 MEX3BQ6ZN04 569 aaKnown RBP10.09□□□□□ -0.79
RHO-201ENST00000296271 ZFP62Q8NB50 900 aaPredicted RBP10.09□□□□□ -0.79
RHO-201ENST00000296271 OR52M1Q8NGK5 317 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 LOXL4Q96JB6 756 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 SCGB3A2Q96PL1 93 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 TP53RKQ96S44 253 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 SHARPINQ9H0F6 387 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 SLC2A9Q9NRM0 540 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 NUP50Q9UKX7 468 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 CADP27708 2225 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 ICE1Q9Y2F5 2266 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 CD300LBA8K4G0 201 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 HS3ST1O14792 307 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 CA11O75493 328 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 ACTL6AO96019 429 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 HERPUD1Q15011 391 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 BAP18Q8IXM2 172 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 SPERTQ8NA61 448 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 CCDC54Q8NEL0 328 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 C17orf50Q8WW18 174 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 RDH5Q92781 318 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 ERGIC1Q969X5 290 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
RHO-201ENST00000296271 KLF13Q9Y2Y9 288 aaPredicted RBP10.09□□□□□ -0.79
RHO-201ENST00000296271 TRGV5A0A0B4J1U4 118 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 IGKV1D-13A0A0B4J2D9 117 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 KLRC4-KLRK1H3BQV0 150 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 FBXO24O75426 580 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 LYZL6O75951 148 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 NXPH3O95157 252 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 F12P00748 615 aaPredicted RBP10.08□□□□□ -0.8
RHO-201ENST00000296271 IGKV1-13P0DP09 117 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 HKR1P10072 659 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 SOX8P57073 446 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 TMEM187Q14656 261 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 ABCA11PQ4W5N1 156 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 HSD17B13Q7Z5P4 300 aaPredicted RBP10.08□□□□□ -0.8
RHO-201ENST00000296271 ZDHHC23Q8IYP9 409 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 FDCSPQ8NFU4 85 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 GLYATL2Q8WU03 294 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 SLC5A7Q9GZV3 580 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 DECR2Q9NUI1 292 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 C1orf123Q9NWV4 160 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 PIEZO2Q9H5I5 2752 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 INTS1Q8N201 2190 aaKnown RBP10.08□□□□□ -0.8
RHO-201ENST00000296271 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 MED19A0JLT2 244 aaPredicted RBP10.08□□□□□ -0.8
RHO-201ENST00000296271 SLC22A20A6NK97 555 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 LINC01387J3KSC0 135 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 LRP3O75074 770 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 FAM157CP0CG43 387 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 PRKACAP17612 351 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 DTYMKP23919 212 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 CYCSP99999 105 aaKnown RBP10.08□□□□□ -0.8
RHO-201ENST00000296271 LDLRAD3Q86YD5 345 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 NEK7Q8TDX7 302 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 APOBEC3DQ96AK3 386 aaPredicted RBP10.08□□□□□ -0.8
RHO-201ENST00000296271 FER1L6-AS2Q96M78 137 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 NAA60Q9H7X0 242 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 ZNF286AQ9HBT8 521 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 ZC4H2Q9NQZ6 224 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 IL36GQ9NZH8 169 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 RFNGQ9Y644 331 aa10.08□□□□□ -0.8
RHO-201ENST00000296271 IGKV1-6A0A0C4DH72 117 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 ZNF724A8MTY0 619 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 PHF1O43189 567 aaPredicted RBP10.07□□□□□ -0.8
RHO-201ENST00000296271 TNFSF12O43508 249 aa10.07□□□□□ -0.8
RHO-201ENST00000296271 SNAPC5O75971 98 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms