RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 SNIP1Q8TAD8 396 aaKnown RBP16.59■□□□□ 0.25
LSM12-201ENST00000293406 MALSU1Q96EH3 234 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 ZNF576Q9H609 170 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 ZNF442Q9H7R0 627 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 TMEM38BQ9NVV0 291 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 IL36GQ9NZH8 169 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 WDR87Q6ZQQ6 2873 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 LOC102723996A0A087X1L8 192 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 FAM24AA6NFZ4 105 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 MPPED1O15442 326 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 PPYP01298 95 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 NQO2P16083 231 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 FUT6P51993 359 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 ZNF266Q14584 549 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 OR8B8Q15620 311 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 TMEM211Q6ICI0 200 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 RARRES2Q99969 163 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 OCIAD1Q9NX40 245 aa16.59■□□□□ 0.25
LSM12-201ENST00000293406 PUS1Q9Y606 427 aaKnown RBP eCLIP16.59■□□□□ 0.25
LSM12-201ENST00000293406 IGHV1-45A0A0A0MS14 117 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 NKX2-6A6NCS4 301 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 OR6C6A6NF89 314 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 GPR37O15354 613 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 CDS2O95674 445 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 B4GALT1P15291 398 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 SSR4P51571 173 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 SRPXP78539 464 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 CDCP2Q5VXM1 449 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 Q6ZPA2 131 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 OR2G3Q8NGZ4 309 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 DUSP23Q9BVJ7 150 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 SF3B5Q9BWJ5 86 aaKnown RBP16.58■□□□□ 0.25
LSM12-201ENST00000293406 SMDT1Q9H4I9 107 aa16.58■□□□□ 0.25
LSM12-201ENST00000293406 OR8U8P0C7N1 319 aa16.58■□□□□ 0.24
LSM12-201ENST00000293406 RBM11P57052 281 aaKnown RBP16.58■□□□□ 0.24
LSM12-201ENST00000293406 PLCXD3Q63HM9 321 aa16.58■□□□□ 0.24
LSM12-201ENST00000293406 SUMF1Q8NBK3 374 aa16.58■□□□□ 0.24
LSM12-201ENST00000293406 OR14L1PQ8NHC6 308 aa16.58■□□□□ 0.24
LSM12-201ENST00000293406 WDR54Q9H977 334 aa16.58■□□□□ 0.24
LSM12-201ENST00000293406 ZNF391Q9UJN7 358 aa16.58■□□□□ 0.24
LSM12-201ENST00000293406 LY6G6EA0A0G2JKS1 128 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 GJE1A6NN92 205 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 TRDCB7Z8K6 153 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 FUT3P21217 361 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 ITGA3P26006 1051 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 ATP6V0CP27449 155 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 NTF4P34130 210 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 NKX2-1P43699 371 aaPredicted RBP16.57■□□□□ 0.24
LSM12-201ENST00000293406 ZNF100Q8IYN0 542 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 TCTEX1D2Q8WW35 142 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 PIGCQ92535 297 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 ALKBH3Q96Q83 286 aaPredicted RBP16.57■□□□□ 0.24
LSM12-201ENST00000293406 TMEM222Q9H0R3 208 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 C11orf1Q9H5F2 150 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 U3KQA8 63 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 hCG_38984A0A1B0GV85 526 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 IGSF23A1L1A6 192 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 AP4M1O00189 453 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 GDF9O60383 454 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 OR7C1O76099 320 aaPredicted RBP16.57■□□□□ 0.24
LSM12-201ENST00000293406 OR2C1O95371 312 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 RPS23P62266 143 aaKnown RBP16.57■□□□□ 0.24
LSM12-201ENST00000293406 POLR2GP62487 172 aaKnown RBP eCLIP16.57■□□□□ 0.24
LSM12-201ENST00000293406 PSG4Q00888 419 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 ZNF92Q03936 586 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 EXT1Q16394 746 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 IGSF11Q5DX21 431 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 IMMP1LQ96LU5 166 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 RFNGQ9Y644 331 aa16.57■□□□□ 0.24
LSM12-201ENST00000293406 PITX3O75364 302 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 CBR3O75828 277 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 IGFBP4P22692 258 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 OMGP23515 440 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 EPHA8P29322 1005 aaPredicted RBP16.56■□□□□ 0.24
LSM12-201ENST00000293406 RAC3P60763 192 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 KRTAP27-1Q3LI81 207 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 ZNF695Q8IW36 515 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 FAM185AQ8N0U4 392 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 ZFP62Q8NB50 900 aaPredicted RBP16.56■□□□□ 0.24
LSM12-201ENST00000293406 CPT1CQ8TCG5 803 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 SLAMF9Q96A28 289 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 P4HTMQ9NXG6 502 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 UBE2J1Q9Y385 318 aaPredicted RBP16.56■□□□□ 0.24
LSM12-201ENST00000293406 RBFOX3A6NFN3 312 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 TXNL1O43396 289 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 IFNA17P01571 189 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 COX6A1P12074 109 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 CCL20P78556 96 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 DPPA2Q7Z7J5 298 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 PAPOLGQ9BWT3 736 aaKnown RBP16.56■□□□□ 0.24
LSM12-201ENST00000293406 PLEKHF2Q9H8W4 249 aa16.56■□□□□ 0.24
LSM12-201ENST00000293406 PTRH2Q9Y3E5 179 aaKnown RBP16.56■□□□□ 0.24
LSM12-201ENST00000293406 CDRT15L2A8MXV6 281 aa16.55■□□□□ 0.24
LSM12-201ENST00000293406 SSSCA1O60232 199 aa16.55■□□□□ 0.24
LSM12-201ENST00000293406 CLN5O75503 358 aa16.55■□□□□ 0.24
LSM12-201ENST00000293406 UMODP07911 640 aa16.55■□□□□ 0.24
LSM12-201ENST00000293406 GNRHRP30968 328 aa16.55■□□□□ 0.24
LSM12-201ENST00000293406 MAS1LP35410 378 aa16.55■□□□□ 0.24
LSM12-201ENST00000293406 EIF2S3P41091 472 aaKnown RBP16.55■□□□□ 0.24
LSM12-201ENST00000293406 BATF2Q8N1L9 274 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms