RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 OR5AP2Q8NGF4 316 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 OR10K1Q8NGX5 313 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 OR13G1Q8NGZ3 307 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF471Q9BX82 626 aaPredicted RBP14.46□□□□□ -0.1
CPSF4-201ENST00000292476 WDR13Q9H1Z4 485 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 PIGMQ9H3S5 423 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 BARX1Q9HBU1 254 aaPredicted RBP14.46□□□□□ -0.1
CPSF4-201ENST00000292476 EDARQ9UNE0 448 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF835Q9Y2P0 537 aa14.46□□□□□ -0.1
CPSF4-201ENST00000292476 PRRC2CQ9Y520 2896 aaKnown RBP14.45□□□□□ -0.1
CPSF4-201ENST00000292476 A0A1W2PP11 408 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 LYZL6O75951 148 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 EDN3P14138 238 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 FAHP16930 419 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 CCNOP22674 350 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 PRKACBP22694 351 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 SNU13P55769 128 aaKnown RBP14.45□□□□□ -0.1
CPSF4-201ENST00000292476 SNTB1Q13884 538 aaKnown RBP14.45□□□□□ -0.1
CPSF4-201ENST00000292476 TUSC1Q2TAM9 212 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 LRRC37A5PQ49AS3 106 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 UQCC3Q6UW78 93 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 MDP1Q86V88 176 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF610Q8N9Z0 462 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 CSNK2A3Q8NEV1 391 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 DMRTA2Q96SC8 542 aa14.45□□□□□ -0.1
CPSF4-201ENST00000292476 GCN1Q92616 2671 aaKnown RBP14.44□□□□□ -0.1
CPSF4-201ENST00000292476 C5orf63A6NC05 138 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 PET100P0DJ07 73 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 CBR1P16152 277 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 NPY4RP50391 375 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 HGFACQ04756 655 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 CNN3Q15417 329 aaKnown RBP14.44□□□□□ -0.1
CPSF4-201ENST00000292476 AADACL3Q5VUY0 350 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 CLEC18BQ6UXF7 455 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 DOLPP1Q86YN1 238 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 SLC30A7Q8NEW0 376 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 Q96M66 194 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 RTBDNQ9BSG5 229 aaPredicted RBP14.44□□□□□ -0.1
CPSF4-201ENST00000292476 HSF4Q9ULV5 492 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 AMDHD2Q9Y303 409 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 HELZ2Q9BYK8 2649 aaKnown RBP14.44□□□□□ -0.1
CPSF4-201ENST00000292476 FREM1Q5H8C1 2179 aa14.44□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF503-AS2A6NEH8 195 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 NUDT19A8MXV4 375 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 EEF1E1-BLOC1S5C9J1V9 151 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 F5H0A9 414 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-201ENST00000292476 GLI4P10075 376 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 OR8B8Q15620 311 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 PRSS54Q6PEW0 395 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 C1QL2Q7Z5L3 287 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 SLC38A6Q8IZM9 456 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 SPERTQ8NA61 448 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 MRPS24Q96EL2 167 aaKnown RBP14.43□□□□□ -0.1
CPSF4-201ENST00000292476 PIK3IP1Q96FE7 263 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 USB1Q9BQ65 265 aaKnown RBP14.43□□□□□ -0.1
CPSF4-201ENST00000292476 EHFQ9NZC4 300 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 DNAJB11Q9UBS4 358 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF629Q9UEG4 869 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-201ENST00000292476 GPR160Q9UJ42 338 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 DOCK7Q96N67 2140 aa14.43□□□□□ -0.1
CPSF4-201ENST00000292476 hCG_38984A0A1B0GV85 526 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 RAB19A4D1S5 217 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 MSTNO14793 375 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 TPT1P13693 172 aaKnown RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 SERPINA2P20848 420 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 CASP6P55212 293 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 SUPT4H1P63272 117 aaKnown RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 FAM3AP98173 230 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 CHRFAM7AQ494W8 412 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 ASCL4Q6XD76 172 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 BHLHA15Q7RTS1 189 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 MRPL21Q7Z2W9 205 aaKnown RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 FAM169BQ8N8A8 192 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 RELL2Q8NC24 303 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 OR2AE1Q8NHA4 323 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 POM121Q96HA1 1249 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 C2orf50Q96LR7 162 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF75AQ96N20 296 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 C1QTNF6Q9BXI9 259 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 METTL9Q9H1A3 318 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 DECR2Q9NUI1 292 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 MEMO1Q9Y316 297 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 RELNP78509 3460 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 GTF3C1Q12789 2109 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF816-ZNF321PA0A0X1KG74 233 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 TEX46H3BTG2 121 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 RPS2P15880 293 aaKnown RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF14P17017 642 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 TUBG1P23258 451 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 DTYMKP23919 212 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 UQCRFS1P47985 274 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 ZNF92Q03936 586 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 ATXN7L3Q14CW9 347 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 TMEM42Q69YG0 159 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 TMEM211Q6ICI0 200 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 LHFPL2Q6ZUX7 228 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 CXorf67Q86X51 503 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 C1orf174Q8IYL3 243 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 LHFPL5Q8TAF8 219 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 DCUN1D4Q92564 292 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms