RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TREM2Q9NZC2 230 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 HSF4Q9ULV5 492 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 B9D1Q9UPM9 204 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 MRPS18BQ9Y676 258 aaKnown RBP10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 SLCO1B1Q9Y6L6 691 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 CYR61O00622 381 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 OGG1O15527 345 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 ZIC2O95409 532 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 FCER1GP30273 86 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 GRB2P62993 217 aaKnown RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 PNRC1Q12796 327 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 TGIF1Q15583 401 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 PNLIPRP3Q17RR3 467 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 DPPA3Q6W0C5 159 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 OR10P1Q8NGE3 313 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 OR2T10Q8NGZ9 312 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 CMTM2Q8TAZ6 248 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 NTNG2Q96CW9 530 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 TM4SF19Q96DZ7 209 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 TPPP3Q9BW30 176 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 PBOV1Q9GZY1 135 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 GUSBP08236 651 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 MDKP21741 143 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 GJC3Q8NFK1 279 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 OR4A16Q8NH70 328 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 OTOSQ8NHW6 89 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 ZNF552Q9H707 407 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 PARP11Q9NR21 331 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 LRRC30A6NM36 301 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 MASP2O00187 686 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 PRKNO60260 465 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 WDR1O75083 606 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 NTN1O95631 604 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 TMIGD3P0DMS9 266 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 RAC1P63000 192 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 SURF2Q15527 256 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 TGIF2LXQ8IUE1 241 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 AMER3Q8N944 861 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 GGACTQ9BVM4 153 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 NMES1Q9C002 83 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 SIRT4Q9Y6E7 314 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 SLC31A2O15432 143 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 AMTP48728 403 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 BSXQ3C1V8 233 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 FAHD2BQ6P2I3 314 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 OR2C3Q8N628 320 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 OR10J5Q8NHC4 309 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 FAHD2AQ96GK7 314 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 GNRHR2Q96P88 292 aa10.05□□□□□ -0.8
NPC1L1-201ENST00000289547 A0A0B4J293 547 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 EFSO43281 561 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 FOXO1Q12778 655 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 CLEC18BQ6UXF7 455 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 ARHGAP5-AS1Q96IT6 56 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 KNTC1P50748 2209 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 LOC101059948A0A1B0GTJ6 334 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 KIAA1324LA8MWY0 1029 aaPredicted RBP10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 ATXN7O15265 892 aaPredicted RBP10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 SIAH2O43255 324 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 HLA-DQB1P01920 261 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 NHLH2Q02577 135 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 FAM78BQ5VT40 261 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 REC114Q7Z4M0 266 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 SLC25A42Q86VD7 318 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 ABHD5Q8WTS1 349 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 Q9N2K0 584 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 NAT8BQ9UHF3 227 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 FUT9Q9Y231 359 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 MAP1LC3B2A6NCE7 125 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 SERPINE3A8MV23 424 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 M0R1B8 84 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 TRGC2P03986 189 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 OR10J1P30954 320 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 FUT7Q11130 342 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 ZNF880Q6PDB4 577 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 MAP1LC3BQ9GZQ8 125 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 DUSP13Q9UII6 198 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 A0A1W2PQD3 144 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 DTYMKP23919 212 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 RAB35Q15286 201 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 COL5A1-AS1Q5SY13 56 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 THEM4Q5T1C6 240 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 KDF1Q8NAX2 398 aaPredicted RBP10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 OR2M7Q8NG81 312 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 NRTNQ99748 197 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 GPA33Q99795 319 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 FAM234AQ9H0X4 552 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 DOK5Q9P104 306 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 GNG12Q9UBI6 72 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 RNF24Q9Y225 148 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 LRP12Q9Y561 859 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 TIMM10BQ9Y5J6 103 aa10.04□□□□□ -0.8
NPC1L1-201ENST00000289547 PRR19A6NJB7 356 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 AQP7P3A6NL99 342 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 CCL21O00585 134 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 SPINK4O60575 86 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 OR8U8P0C7N1 319 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 HIST1H1DP16402 221 aaKnown RBP10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 BMP5P22003 454 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms