RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 NGFP01138 241 aa14.58□□□□□ -0.07
SH3RF1-201ENST00000284637 ERVS71-1P61550 626 aa14.58□□□□□ -0.07
SH3RF1-201ENST00000284637 SPINK9Q5DT21 86 aa14.58□□□□□ -0.07
SH3RF1-201ENST00000284637 YTHDF2Q9Y5A9 579 aaKnown RBP14.58□□□□□ -0.07
SH3RF1-201ENST00000284637 ZNF205O95201 554 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 GCGP01275 180 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 DRD3P35462 400 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 ZNF154Q13106 437 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 C19orf35Q6ZS72 473 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 ZAR1Q86SH2 424 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 C11orf42Q8N5U0 333 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 NEU3Q9UQ49 428 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 KIAA1324LA8MWY0 1029 aaPredicted RBP14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 TMIGD3P0DMS9 266 aaPredicted RBP14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 CA6P23280 308 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 ZNF124Q15973 351 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 DCAF12L2Q5VW00 463 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 WDR13Q9H1Z4 485 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 DCAF16Q9NXF7 216 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 TGIF2LXQ8IUE1 241 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 NAT8Q9UHE5 227 aa14.58□□□□□ -0.08
SH3RF1-201ENST00000284637 AMTP48728 403 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 PSG6Q00889 435 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 GLRX5Q86SX6 157 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 WFDC8Q8IUA0 241 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 SARAFQ96BY9 339 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 COX14Q96I36 57 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 LRFN3Q9BTN0 628 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 MSL2Q9HCI7 577 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 RREB1Q92766 1687 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 A0A1W2PR80 420 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 LNP1A1A4G5 178 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 GYPAP02724 150 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 CELA2BP08218 269 aaPredicted RBP14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 ANKRD34CP0C6C1 535 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 SEC11BP0C7V7 166 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 SPINK2P20155 84 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 FZD5Q13467 585 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 SFTPA1Q8IWL2 248 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 OR4C45A6NMZ5 311 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 DPPA3Q6W0C5 159 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 OR8B12Q8NGG6 310 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 OR10C1Q96KK4 312 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 PECRQ9BY49 303 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 FCGR3BO75015 233 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 SRFP11831 508 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 CCL2P13500 99 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 HFEQ30201 348 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 MTCH2Q9Y6C9 303 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 CEP290O15078 2479 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 SARGQ9BW04 601 aa14.57□□□□□ -0.08
SH3RF1-201ENST00000284637 CRISP2P16562 243 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 TEX30Q5JUR7 227 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 RGP1Q92546 391 aaPredicted RBP14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 ZNF707Q96C28 371 aaPredicted RBP14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 CHRDL1Q9BU40 450 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 DDA1Q9BW61 102 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 KIAA1456Q9P272 454 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 VSIG10L2P0DP72 767 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 GPR3P46089 330 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 ARL6IP6Q8N6S5 226 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 HIST1H2BAQ96A08 127 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 POM121L2Q96KW2 1035 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 RBM14Q96PK6 669 aaKnown RBP14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 PLA2G2FQ9BZM2 168 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 PAM16Q9Y3D7 125 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 FCN1O00602 326 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 CTGFP29279 349 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 PAX5Q02548 391 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 SLC52A3Q9NQ40 469 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 DOK5Q9P104 306 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 PSG11Q9UQ72 335 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 SIRT4Q9Y6E7 314 aaPredicted RBP14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 NPIPB9F8W1W9 429 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 RNF224P0DH78 156 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 EFNB2P52799 333 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 SURF2Q15527 256 aaPredicted RBP14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 FAM78BQ5VT40 261 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 TAAR3PQ9P1P4 343 aa14.56□□□□□ -0.08
SH3RF1-201ENST00000284637 CXorf65A6NEN9 183 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 HRKO00198 91 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 RNASEKQ6P5S7 137 aaKnown RBP14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 ZNF738Q8NE65 137 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 STARD4Q96DR4 205 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 TBX15Q96SF7 602 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 ANXA10Q9UJ72 324 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 SEMA7AO75326 666 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 SULT1A2P50226 295 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 DYNLT3P51808 116 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 STUMQ69YW2 141 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 OR5AU1Q8NGC0 362 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 WNT2BQ93097 391 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 MFRPQ9BY79 579 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 GPR61Q9BZJ8 451 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 PLA2G3Q9NZ20 509 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 RCC2Q9P258 522 aaKnown RBP14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 PRSS50Q9UI38 385 aa14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 DNASE2O00115 360 aaPredicted RBP14.55□□□□□ -0.08
SH3RF1-201ENST00000284637 CTSDP07339 412 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms