RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SLC25A35Q3KQZ1 300 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ZNF876PQ49A33 203 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 WDR25Q64LD2 544 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 DEFB132Q7Z7B7 95 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ZBTB8OSQ8IWT0 167 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 TMEM234Q8WY98 164 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 MAFIPQ8WZ33 124 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 METTL26Q96S19 204 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 SPANXCQ9NY87 97 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 UGT2A1Q9Y4X1 527 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 NUBP2Q9Y5Y2 271 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ZNFX1Q9P2E3 1918 aaKnown RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 RAD1O60671 282 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 VAMP5O95183 116 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 NADKO95544 446 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 GABRR1P24046 479 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 CAPZBP47756 277 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 SHHQ15465 462 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ORMDL2Q53FV1 153 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 SMUG1Q53HV7 270 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 PHF13Q86YI8 300 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 GRPEL2Q8TAA5 225 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 RMND5BQ96G75 393 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 QKIQ96PU8 341 aaKnown RBP eCLIP2.23□□□□□ -2.05
CHD1-201ENST00000284049 GPER1Q99527 375 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 PRRT1Q99946 306 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 SULT4A1Q9BR01 284 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ZNF2Q9BSG1 426 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 IL25Q9H293 177 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 SLC25A37Q9NYZ2 338 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 TANC1Q9C0D5 1861 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 IGKV6D-21A0A0A0MT36 114 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 IGHV7-81A0A0B4J1V7 117 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 FOXI3A8MTJ6 420 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 COILP38432 576 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 PTGDSP41222 190 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 TAS2R41P59536 307 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ERVK11-1P61568 191 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 PPP1R1AQ13522 171 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 WHAMMP3Q1A5X7 153 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 STPG1Q5TH74 334 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ELP2Q6IA86 826 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 GALNT10Q86SR1 603 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 MYPOPQ86VE0 399 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 C9orf40Q8IXQ3 194 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 C4orf32Q8N8J7 132 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 C1orf54Q8WWF1 131 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 SH2D2AQ9NP31 389 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 RALGAPA2Q2PPJ7 1873 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 M0R1B8 84 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 CHP2O43745 196 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 COX7A2P2O60397 106 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 IGHV3-9P01782 118 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 TCTAP57738 103 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 TPI1P60174 286 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 SLC7A9P82251 487 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 FAM3AP98173 230 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 FZD2Q14332 565 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 CEACAM21Q3KPI0 293 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ZNF658BQ4V348 819 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 C1orf146Q5VVC0 180 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 TNFAIP8L2Q6P589 184 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 PLET1Q6UQ28 207 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 STAC2Q6ZMT1 411 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 PRSS41Q7RTY9 318 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 LYG2Q86SG7 212 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 BLIDQ8IZY5 108 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 C2orf73Q8N5S3 287 aaPredicted RBP2.23□□□□□ -2.05
CHD1-201ENST00000284049 WDSUB1Q8N9V3 476 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 RXFP4Q8TDU9 374 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 RSG1Q9BU20 258 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 ARMC1Q9NVT9 282 aa2.23□□□□□ -2.05
CHD1-201ENST00000284049 LRRK1Q38SD2 2015 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 RPL37AP8A6NKH3 93 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 B4DEV8 164 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 HMGB3O15347 200 aaKnown RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 EDIL3O43854 480 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 NDUFS5O43920 106 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ACTL6AO96019 429 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 IL3P08700 152 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 HOXC4P09017 264 aaPredicted RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 ZDHHC11BP0C7U3 371 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 SLC6A1P30531 599 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 CCKARP32238 428 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 GABARAPL2P60520 117 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ACTBP60709 375 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 RAB2AP61019 212 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 RPS14P62263 151 aaKnown RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 ACTG1P63261 375 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 GTF2BQ00403 316 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 AQP6Q13520 282 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 CDK10Q15131 360 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 SIX1Q15475 284 aaPredicted RBP2.22□□□□□ -2.05
CHD1-201ENST00000284049 ZNF718Q3SXZ3 478 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 ATP6AP1LQ52LC2 224 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 H2AFVQ71UI9 128 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 COMMD7Q86VX2 200 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 SLC34A3Q8N130 599 aa2.22□□□□□ -2.05
CHD1-201ENST00000284049 OR6V1Q8N148 313 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms