RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 HLA-DOBP13765 273 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 PAX1P15863 534 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 AKR1C3P42330 323 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF133P52736 654 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 FMODQ06828 376 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 PLCXD2Q0VAA5 305 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 KIAA0141Q14154 515 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 EXT1Q16394 746 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 IGFL3Q6UXB1 125 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 RBMXL3Q8N7X1 1067 aaKnown RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 NFAM1Q8NET5 270 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 OR10G4Q8NGN3 311 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 OR51E1Q8TCB6 317 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 ISOC2Q96AB3 205 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 ABHD14BQ96IU4 210 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 WWTR1Q9GZV5 400 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 WFDC1Q9HC57 220 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 PNO1Q9NRX1 252 aaKnown RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 UFSP2Q9NUQ7 469 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 ALKBH4Q9NXW9 302 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 GAR1Q9NY12 217 aaKnown RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 PRR13Q9NZ81 148 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 IGKV1D-43A0A0B4J1Z2 117 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 IFITM10A6NMD0 228 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 MBPP02686 304 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 HPNP05981 417 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 HIST1H1BP16401 226 aaKnown RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF17P17021 662 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 PI3P19957 117 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 S100A2P29034 98 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 KLRB1Q12918 225 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 TMEM187Q14656 261 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 PYY3Q5JQD4 70 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 HLA-DQA1Q5Y7H0 255 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 IGFL2Q6UWQ7 119 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 OR14K1Q8NGZ2 314 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 M1APQ8TC57 530 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 RNF138Q8WVD3 245 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 GTF3AQ92664 365 aaKnown RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 CPNE4Q96A23 557 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 MRPL24Q96A35 216 aaKnown RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 C18orf12Q96KH6 178 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 OR11A1Q9GZK7 315 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 EIF5A2Q9GZV4 153 aaKnown RBP8.97□□□□□ -0.97
UPF3B-201ENST00000276201 C11orf1Q9H5F2 150 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 KCNIP3Q9Y2W7 256 aa8.97□□□□□ -0.97
UPF3B-201ENST00000276201 A0A1W2PPE2 198 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 NME2P1O60361 137 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 CRTAPO75718 401 aaPredicted RBP8.96□□□□□ -0.98
UPF3B-201ENST00000276201 WISP1O95388 367 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 NUDT14O95848 222 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF43P17038 809 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 DTYMKP23919 212 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 UCP3P55916 312 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF121P58317 390 aaPredicted RBP8.96□□□□□ -0.98
UPF3B-201ENST00000276201 GRB2P62993 217 aaKnown RBP8.96□□□□□ -0.98
UPF3B-201ENST00000276201 DEFA6Q01524 100 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 SLC25A53Q5H9E4 307 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 SOHLH1Q5JUK2 328 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 SLC25A47Q6Q0C1 308 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 CRIP3Q6Q6R5 217 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 SUMF2Q8NBJ7 301 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 OR8B12Q8NGG6 310 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 OR51T1Q8NGJ9 327 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 DAZLQ92904 295 aaKnown RBP8.96□□□□□ -0.98
UPF3B-201ENST00000276201 SGK3Q96BR1 496 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 PFDN5Q99471 154 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 RSRP1Q9BUV0 290 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 OR8D2Q9GZM6 311 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 NAA60Q9H7X0 242 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 LHFPL6Q9Y693 200 aa8.96□□□□□ -0.98
UPF3B-201ENST00000276201 B4DEV8 164 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 GMFGO60234 142 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 MFAP5Q13361 173 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 Q3ZCU0 254 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 AKIRIN2Q53H80 203 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 DPPA3Q6W0C5 159 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 LINC00696Q6ZRV3 163 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 REC114Q7Z4M0 266 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 TMEM156Q8N614 296 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF610Q8N9Z0 462 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 SEMA6DQ8NFY4 1073 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 FBXO17Q96EF6 278 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 ANGPTL4Q9BY76 406 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 BANF2Q9H503 90 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 PNRC2Q9NPJ4 139 aaKnown RBP8.95□□□□□ -0.98
UPF3B-201ENST00000276201 KIAA1456Q9P272 454 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 HSF4Q9ULV5 492 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 CNTRLQ7Z7A1 2325 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 A0A0U1RQV5 110 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 LIPT2A6NK58 231 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 ARG1P05089 322 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 HCKP08631 526 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 DUSP1P28562 367 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 RBP2P50120 134 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF616Q08AN1 781 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 POMZP3Q6PJE2 187 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 RNF144BQ7Z419 303 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms