RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CAMPP49913 170 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 RNF165Q6ZSG1 346 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 OR2M7Q8NG81 312 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 AHCTF1Q8WYP5 2266 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 CENPVL1A0A0U1RR11 272 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 PRSS23O95084 383 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 MMP7P09237 267 aaPredicted RBP10.11□□□□□ -0.79
USP53-201ENST00000274030 GALR1P47211 349 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 TMEM33P57088 247 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 HIST1H3AP68431 136 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 CLLU1Q5K131 121 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 BHLHA15Q7RTS1 189 aaPredicted RBP10.11□□□□□ -0.79
USP53-201ENST00000274030 DUSP18Q8NEJ0 188 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 OR10G4Q8NGN3 311 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 OR10G9Q8NGN4 311 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 OR10G7Q8NGN6 311 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 ASB13Q8WXK3 278 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 J3KRW8 73 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 GALP22466 123 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 RAB7AP51149 207 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 MRPS11P82912 194 aaKnown RBP10.11□□□□□ -0.79
USP53-201ENST00000274030 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 PIK3IP1Q96FE7 263 aa10.11□□□□□ -0.79
USP53-201ENST00000274030 CDC34P49427 236 aaPredicted RBP10.1□□□□□ -0.79
USP53-201ENST00000274030 GNG4P50150 75 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 JMJD6Q6NYC1 403 aaPredicted RBP10.1□□□□□ -0.79
USP53-201ENST00000274030 LYPD8Q6UX82 237 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 WDR31Q8NA23 367 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 CLRN3Q8NCR9 226 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 OR5D13Q8NGL4 314 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 SEBOXQ9HB31 216 aaPredicted RBP10.1□□□□□ -0.79
USP53-201ENST00000274030 PAPPA2Q9BXP8 1791 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 OR5B21A6NL26 309 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 TMEM241Q24JQ0 296 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 TOMM20LQ6UXN7 152 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 D2HGDHQ8N465 521 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 OR1B1Q8NGR6 318 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 MMP26Q9NRE1 261 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 ANXA10Q9UJ72 324 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 DOCK2Q92608 1830 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 TRAV8-7A0A075B6U6 113 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 CD3EP07766 207 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 CD200P41217 278 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 DYNLT3P51808 116 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 PRRX1P54821 245 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 PIGYQ3MUY2 71 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 NTNG2Q96CW9 530 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 TMEM208Q9BTX3 173 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 SLC52A3Q9NQ40 469 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 SRP14P37108 136 aaKnown RBP10.1□□□□□ -0.79
USP53-201ENST00000274030 MDH2P40926 338 aaKnown RBP10.1□□□□□ -0.79
USP53-201ENST00000274030 SCN7AQ01118 1682 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 SPICQ8N5J4 248 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 LPAR2Q9HBW0 351 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 CCL27Q9Y4X3 112 aa10.1□□□□□ -0.79
USP53-201ENST00000274030 HTN1P15515 57 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 AMTP48728 403 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 TPPP2P59282 170 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 WDR74Q6RFH5 385 aaPredicted RBP10.09□□□□□ -0.79
USP53-201ENST00000274030 CLEC18BQ6UXF7 455 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 OR10D4PQ8NGN7 298 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 MARVELD1Q9BSK0 173 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 A0A1B0GTQ1 180 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 A0A1W2PN81 502 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 CDRT15L2A8MXV6 281 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 DNASE2O00115 360 aaPredicted RBP10.09□□□□□ -0.79
USP53-201ENST00000274030 CXCL3P19876 107 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 VPS25Q9BRG1 176 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 MPC1Q9Y5U8 109 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 IGHV3OR15-7A0A075B7D8 119 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 TRAV34A0A0B4J273 112 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 OR4A8P0C604 315 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 RAB5AP20339 215 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 PEBP1P30086 187 aaKnown RBP10.09□□□□□ -0.79
USP53-201ENST00000274030 PRSS54Q6PEW0 395 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 C9orf40Q8IXQ3 194 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 GAPTQ8N292 157 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 RAB1BQ9H0U4 201 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 CCL28Q9NRJ3 127 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 OR6C3Q9NZP0 311 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 BMPR1BO00238 502 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 TGOLN2O43493 480 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 LANCL1O43813 399 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 SLC6A1P30531 599 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 SSMEM1Q8WWF3 244 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 GPA33Q99795 319 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 WDR61Q9GZS3 305 aaKnown RBP10.09□□□□□ -0.79
USP53-201ENST00000274030 SLC45A2Q9UMX9 530 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 K7ESF4 209 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 CHST1O43916 411 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 PNPP00491 289 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 HNRNPA3P51991 378 aaKnown RBP10.09□□□□□ -0.79
USP53-201ENST00000274030 NUFIP2Q7Z417 695 aaKnown RBP10.09□□□□□ -0.79
USP53-201ENST00000274030 APOBEC4Q8WW27 367 aaKnown RBP10.09□□□□□ -0.79
USP53-201ENST00000274030 RAB1CQ92928 201 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 UBTD1Q9HAC8 227 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 NHSQ6T4R5 1651 aa10.09□□□□□ -0.79
USP53-201ENST00000274030 FCN1O00602 326 aa10.08□□□□□ -0.8
USP53-201ENST00000274030 HAND1O96004 215 aa10.08□□□□□ -0.8
USP53-201ENST00000274030 HPXP02790 462 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms