RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TMPRSS5Q9H3S3 457 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 LIPGQ9Y5X9 500 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 H3BQ15 152 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 AFF3P51826 1226 aaKnown RBP23.8■■□□□ 1.4
CBX4-201ENST00000269397 HERV-K104P61576 105 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 MOB3AQ96BX8 217 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 YPEL4Q96NS1 127 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 ANGPTL4Q9BY76 406 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 ZNF286AQ9HBT8 521 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 P4HTMQ9NXG6 502 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 SSSCA1O60232 199 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 CDPF1Q6NVV7 123 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 OSR2Q8N2R0 312 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 TMEM217Q8N7C4 229 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 RAB39BQ96DA2 213 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 GDF9O60383 454 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 CST7O76096 145 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 NR2C1P13056 603 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 NDUFA6P56556 154 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 RND3P61587 244 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 RAB1AP62820 205 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 SPSB3Q6PJ21 355 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 TOLLIPQ9H0E2 274 aa23.79■■□□□ 1.4
CBX4-201ENST00000269397 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.78■■□□□ 1.4
CBX4-201ENST00000269397 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.78■■□□□ 1.4
CBX4-201ENST00000269397 IFITM10A6NMD0 228 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 Q6ZSR3 168 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 NTNG2Q96CW9 530 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 C10orf35Q96D05 121 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 MUCL1Q96DR8 90 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 ZNF442Q9H7R0 627 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 C3orf85A0A1B0GTC6 90 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 TNFSF11O14788 317 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 DKK1O94907 266 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 TAGLN2P37802 199 aaKnown RBP23.78■■□□□ 1.4
CBX4-201ENST00000269397 RUNX1Q01196 453 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 CXorf66Q5JRM2 361 aaPredicted RBP23.78■■□□□ 1.4
CBX4-201ENST00000269397 C9orf152Q5JTZ5 239 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 ZIC4Q8N9L1 334 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 LFNGQ8NES3 379 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 SLC7A11Q9UPY5 501 aa23.78■■□□□ 1.4
CBX4-201ENST00000269397 NRASP01111 189 aa23.77■■□□□ 1.4
CBX4-201ENST00000269397 MAML2Q8IZL2 1156 aaPredicted RBP23.77■■□□□ 1.4
CBX4-201ENST00000269397 TMED3Q9Y3Q3 217 aa23.77■■□□□ 1.4
CBX4-201ENST00000269397 CNN3Q15417 329 aaKnown RBP23.77■■□□□ 1.4
CBX4-201ENST00000269397 SPIN3Q5JUX0 258 aa23.77■■□□□ 1.4
CBX4-201ENST00000269397 OR14L1PQ8NHC6 308 aa23.77■■□□□ 1.4
CBX4-201ENST00000269397 CXCL1P09341 107 aa23.77■■□□□ 1.39
CBX4-201ENST00000269397 CRYGSP22914 178 aa23.77■■□□□ 1.39
CBX4-201ENST00000269397 NKX2-1P43699 371 aaPredicted RBP23.77■■□□□ 1.39
CBX4-201ENST00000269397 HTR5AP47898 357 aa23.77■■□□□ 1.39
CBX4-201ENST00000269397 RAB2AP61019 212 aa23.77■■□□□ 1.39
CBX4-201ENST00000269397 BCO1Q9HAY6 547 aa23.77■■□□□ 1.39
CBX4-201ENST00000269397 MPPED1O15442 326 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 OR7C1O76099 320 aaPredicted RBP23.76■■□□□ 1.39
CBX4-201ENST00000269397 PPYP01298 95 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 CCL3P10147 92 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 FOXL2NBQ6ZUU3 175 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 OR5C1Q8NGR4 320 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 GLRX2Q9NS18 164 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 WNT16Q9UBV4 365 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 FOXD3Q9UJU5 478 aaPredicted RBP23.76■■□□□ 1.39
CBX4-201ENST00000269397 ZNHIT1O43257 154 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 UBE2KP61086 200 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 ZNF674Q2M3X9 581 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 P4HA3Q7Z4N8 544 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 Q8WTZ3 238 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 CRLF2Q9HC73 371 aa23.76■■□□□ 1.39
CBX4-201ENST00000269397 UBE2J1Q9Y385 318 aaPredicted RBP23.76■■□□□ 1.39
CBX4-201ENST00000269397 B4GALT1P15291 398 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 EPHA1P21709 976 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 NTF4P34130 210 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 HIKESHIQ53FT3 197 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 PYY3Q5JQD4 70 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 CYB561D1Q8N8Q1 229 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 RARRES3Q9UL19 164 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 PROB1E7EW31 1015 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 TERTO14746 1132 aaKnown RBP23.75■■□□□ 1.39
CBX4-201ENST00000269397 SYNGR3O43761 229 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 NDUFS6O75380 124 aaKnown RBP23.75■■□□□ 1.39
CBX4-201ENST00000269397 RGS19P49795 217 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 OR2B11Q5JQS5 317 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 FAM27BQ5VT28 67 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 CCDC71LQ8N9Z2 235 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 CADM4Q8NFZ8 388 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 PIGCQ92535 297 aa23.75■■□□□ 1.39
CBX4-201ENST00000269397 ALKBH3Q96Q83 286 aaPredicted RBP23.75■■□□□ 1.39
CBX4-201ENST00000269397 A0A0J9YW62 118 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 TP53I11O14683 189 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 HSD17B6O14756 317 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 MALLQ13021 153 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 ZNF266Q14584 549 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 C1QL4Q86Z23 238 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 PAPOLGQ9BWT3 736 aaKnown RBP23.74■■□□□ 1.39
CBX4-201ENST00000269397 SRXN1Q9BYN0 137 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 DOK5Q9P104 306 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 HOXA5P20719 270 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 GNRHRP30968 328 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 DLK1P80370 383 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 ZNF695Q8IW36 515 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms