RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 ARSBP15848 533 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 MGMTP16455 207 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 NDUFB7P17568 137 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 LMO1P25800 156 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 SDC2P34741 201 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 MPV17LQ2QL34 196 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 Q6P435 159 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 BTNL3Q6UXE8 466 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 BTN2A1Q7KYR7 527 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 OR4M2Q8NGB6 313 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 OR5D13Q8NGL4 314 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 KCNG3Q8TAE7 436 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 RAB40AQ8WXH6 277 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 SLC25A28Q96A46 364 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 MMP26Q9NRE1 261 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 STEAP1Q9UHE8 339 aa13.66□□□□□ -0.22
SNRPF-201ENST00000266735 IGHV2-70DA0A0C4DH43 119 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 TMEM82A0PJX8 343 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 A8MV72 311 aaPredicted RBP13.65□□□□□ -0.22
SNRPF-201ENST00000266735 C22orf46C9J442 243 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 J3QLI3 93 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 SIRPB1O00241 398 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 PSPNO60542 156 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 GABARAPO95166 117 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 LIPFP07098 398 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 VSIG8P0DPA2 414 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 GABRR1P24046 479 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 PAX2Q02962 417 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 P2RY14Q15391 338 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 HES5Q5TA89 166 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 DCAF12L2Q5VW00 463 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 C17orf107Q6ZR85 190 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 NR2C2APQ86WQ0 139 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 ANKRD13BQ86YJ7 626 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 OR8H2Q8N162 312 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 FGFRL1Q8N441 504 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 TMEM104Q8NE00 496 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 H1FXQ92522 213 aaKnown RBP13.65□□□□□ -0.22
SNRPF-201ENST00000266735 FAM46BQ96A09 425 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 DACT3Q96B18 629 aaPredicted RBP13.65□□□□□ -0.22
SNRPF-201ENST00000266735 DCTN5Q9BTE1 182 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 IFT22Q9H7X7 185 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 RPUSD1Q9UJJ7 312 aaKnown RBP13.65□□□□□ -0.22
SNRPF-201ENST00000266735 BOLA1Q9Y3E2 137 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 INSIG2Q9Y5U4 225 aa13.65□□□□□ -0.22
SNRPF-201ENST00000266735 TRBV23-1A0A0A0MS06 115 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 A0A0G2JK05 382 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 KIR2DS1A0A191URI9 304 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 TMEM14DPA8MWL7 114 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 GEMIN2O14893 280 aaKnown RBP13.64□□□□□ -0.23
SNRPF-201ENST00000266735 OR7C1O76099 320 aaPredicted RBP13.64□□□□□ -0.23
SNRPF-201ENST00000266735 MPIG6BO95866 241 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 CLDN12P56749 244 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 LSM3P62310 102 aaKnown RBP13.64□□□□□ -0.23
SNRPF-201ENST00000266735 SCN1BQ07699 218 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 PDCD1Q15116 288 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 GPR107Q5VW38 600 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 FAHD2BQ6P2I3 314 aaPredicted RBP13.64□□□□□ -0.23
SNRPF-201ENST00000266735 GDPD3Q7L5L3 318 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 OR2W3Q7Z3T1 314 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 OR51D1Q8NGF3 324 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 FAM3DQ96BQ1 224 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 FAHD2AQ96GK7 314 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 DMRTB1Q96MA1 342 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 NUDT16L1Q9BRJ7 211 aaKnown RBP13.64□□□□□ -0.23
SNRPF-201ENST00000266735 TMEM59Q9BXS4 323 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 SELENOIQ9C0D9 397 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 SHARPINQ9H0F6 387 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 BANF2Q9H503 90 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 TMEM160Q9NX00 188 aa13.64□□□□□ -0.23
SNRPF-201ENST00000266735 FLNAP21333 2647 aaKnown RBP13.64□□□□□ -0.23
SNRPF-201ENST00000266735 HIVEP1P15822 2718 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 SMIM30A4D0T7 59 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A10PA6NDY2 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A18PA6NE21 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A16PA6NEW6 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A20PA6NIJ5 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A8PA6NJQ4 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A7PA6NKC0 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A22PA8MWA6 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A12PA8MX19 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A5PA8MXJ8 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A23PA8MXZ1 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 H3BUI4 141 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 SLC33A1O00400 549 aaPredicted RBP13.63□□□□□ -0.23
SNRPF-201ENST00000266735 MGST3O14880 152 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A15PP0C7V4 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A13PP0C7W8 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A14PP0C7W9 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 FAM90A24PP0C7X0 464 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 OR3A1P47881 315 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 QRFPP83859 136 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 MXD1Q05195 221 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 GRK1Q15835 563 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 TAF9Q16594 264 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 OR10K2Q6IF99 312 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 SFXN4Q6P4A7 337 aa13.63□□□□□ -0.23
SNRPF-201ENST00000266735 SLC16A12Q6ZSM3 486 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms