RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TUBAL3A6NHL2 446 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 GEMIN2O14893 280 aaKnown RBP13.52□□□□□ -0.25
TIMP3-201ENST00000266085 ICMTO60725 284 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 FCGR3BO75015 233 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 CLEC3BP05452 202 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 VSIG8P0DPA2 414 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 CBR1P16152 277 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 UCNP55089 124 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 ATP1A1-AS1Q5TC04 95 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 PATZ1Q9HBE1 687 aaKnown RBP13.52□□□□□ -0.25
TIMP3-201ENST00000266085 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.52□□□□□ -0.25
TIMP3-201ENST00000266085 OR6C3Q9NZP0 311 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 PPIHO43447 177 aaKnown RBP13.52□□□□□ -0.25
TIMP3-201ENST00000266085 PDZK1IP1Q13113 114 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 RAB32Q13637 225 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 SURF2Q15527 256 aaPredicted RBP13.52□□□□□ -0.25
TIMP3-201ENST00000266085 Q3ZCU0 254 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 CDCP2Q5VXM1 449 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 INO80CQ6PI98 192 aaPredicted RBP13.52□□□□□ -0.25
TIMP3-201ENST00000266085 OR4F5Q8NH21 305 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 ADAT3Q96EY9 351 aaPredicted RBP13.52□□□□□ -0.25
TIMP3-201ENST00000266085 C14orf79Q96F83 325 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 OR4F4Q96R69 305 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 SOX7Q9BT81 388 aa13.52□□□□□ -0.25
TIMP3-201ENST00000266085 TTRP02766 147 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 RRASP10301 218 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 RAB7AP51149 207 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 TRMT61AQ96FX7 289 aaKnown RBP13.51□□□□□ -0.25
TIMP3-201ENST00000266085 J3QT63 122 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 MPC2O95563 127 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 GNG10P50151 68 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 CEBPEQ15744 281 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 NKX6-2Q9C056 277 aaPredicted RBP13.51□□□□□ -0.25
TIMP3-201ENST00000266085 GAL3ST2Q9H3Q3 398 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 PI4KAP42356 2102 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 C17orf51A8MQB3 221 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 ADAM20O43506 726 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 CST4P01036 141 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 ADRB1P08588 477 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 OR5AC1P0C628 307 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 LPAR6P43657 344 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 FAHD2BQ6P2I3 314 aaPredicted RBP13.51□□□□□ -0.25
TIMP3-201ENST00000266085 OR5A2Q8NGI9 324 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 FAHD2AQ96GK7 314 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 RAB40CQ96S21 281 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 TPPP3Q9BW30 176 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 RPS4Y1P22090 263 aaKnown RBP13.51□□□□□ -0.25
TIMP3-201ENST00000266085 TIGITQ495A1 244 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 GGNBP1Q5YKI7 109 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 RPUSD4Q96CM3 377 aaKnown RBP13.51□□□□□ -0.25
TIMP3-201ENST00000266085 GPR27Q9NS67 375 aa13.51□□□□□ -0.25
TIMP3-201ENST00000266085 TMEM11P17152 192 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 RAB4AP20338 218 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 CSN1S1P47710 185 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 BPIFB3P59826 476 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 KHDC1LQ5JSQ8 128 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 OR2D2Q9H210 308 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 GFRA3O60609 400 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 MPV17LQ2QL34 196 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 RPS4Y2Q8TD47 263 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 RXFP4Q8TDU9 374 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 GAB2Q9UQC2 676 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 OSGIN2Q9Y236 505 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
TIMP3-201ENST00000266085 IGHV3-43A0A0B4J1X8 118 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 PPP5D1E7EU14 171 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 CLN5O75503 358 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 CTSDP07339 412 aaPredicted RBP13.5□□□□□ -0.25
TIMP3-201ENST00000266085 IGHV3-43DP0DP04 118 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 SLC25A6P12236 298 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 ESPL1Q14674 2120 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 MDP1Q86V88 176 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 RFLNBQ8N5W9 214 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 LSM2Q9Y333 95 aaKnown RBP13.5□□□□□ -0.25
TIMP3-201ENST00000266085 PATJQ8NI35 1801 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 LRRC37A2A6NM11 1700 aa13.5□□□□□ -0.25
TIMP3-201ENST00000266085 ONECUT2O95948 504 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 CD1AP06126 327 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 CT45A10P0DMU9 189 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 FGF7P21781 194 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 SLC25A40Q8TBP6 338 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 RPEQ96AT9 228 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 NTNG2Q96CW9 530 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 TMEM56Q96MV1 263 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 GINS3Q9BRX5 216 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 MTCH1Q9NZJ7 389 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 ZNF107Q9UII5 783 aaPredicted RBP13.49□□□□□ -0.25
TIMP3-201ENST00000266085 CACNA1BQ00975 2339 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 C16orf97H3BN30 126 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 PLA2G10O15496 165 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 KIR3DL2P43630 455 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 SCGB2A2Q13296 93 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 ZNF239Q16600 458 aaKnown RBP13.49□□□□□ -0.25
TIMP3-201ENST00000266085 HIST2H3AQ71DI3 136 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 PPP1R32Q7Z5V6 425 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 CACNG5Q9UF02 275 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 PRSS44E7EML9 344 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 LY86O95711 162 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 IGHV3-13P01766 116 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms