RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 LBX1P52954 281 aa5.11□□□□□ -1.59
VCAN-201ENST00000265077 TTC32Q5I0X7 151 aa5.11□□□□□ -1.59
VCAN-201ENST00000265077 KLHDC9Q8NEP7 349 aa5.11□□□□□ -1.59
VCAN-201ENST00000265077 LINC00615Q96LM1 132 aaPredicted RBP5.11□□□□□ -1.59
VCAN-201ENST00000265077 FAAP24Q9BTP7 215 aa5.11□□□□□ -1.59
VCAN-201ENST00000265077 ZNF835Q9Y2P0 537 aa5.11□□□□□ -1.59
VCAN-201ENST00000265077 HDGFL3Q9Y3E1 203 aa5.11□□□□□ -1.59
VCAN-201ENST00000265077 KIAA1549Q9HCM3 1950 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 LRRC30A6NM36 301 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 ZNF891A8MT65 544 aaPredicted RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 ARL16Q0P5N6 197 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 RAB18Q9NP72 206 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 NPDC1Q9NQX5 325 aaPredicted RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 OBP2AQ9NY56 170 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 IGHA1P01876 353 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 LTC4SQ16873 150 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 KMT5CQ86Y97 462 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 BANF2Q9H503 90 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 TNFRSF12AQ9NP84 129 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 MRPS2Q9Y399 296 aaKnown RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 PCDH15Q96QU1 1955 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 TIMM8AO60220 97 aaPredicted RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 NRASP01111 189 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 ARR3P36575 388 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 C1QL4Q86Z23 238 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 PRRX2Q99811 253 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 TMEM191AQ9H0A3 160 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 TMEM265A0A087WTH1 108 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 A0A1B0GX78 115 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 FIGNL2A6NMB9 653 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 PGA4P0DJD7 388 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 PGA3P0DJD8 388 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 PGA5P0DJD9 388 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 CD1BP29016 333 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 FZD5Q13467 585 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 PLAC9Q5JTB6 97 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 VN1R2Q8NFZ6 395 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 OR2Y1Q8NGV0 311 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 TPPP3Q9BW30 176 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 GPR179Q6PRD1 2367 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 SH2D1BO14796 132 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 HRASP01112 189 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 KRASP01116 189 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 MC5RP33032 325 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 TDGF1P3P51864 188 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 RPL18Q07020 188 aaKnown RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 TBC1D28Q2M2D7 210 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 GINS3Q9BRX5 216 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 PBOV1Q9GZY1 135 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 LY75O60449 1722 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 SERTM2A0A1B0GWG4 89 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 FITM1A5D6W6 292 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 BRS3P32247 399 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 NPBWR2P48146 333 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 RRADP55042 308 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 UBE2V1Q13404 147 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 FAM78BQ5VT40 261 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 NT5CQ8TCD5 201 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 NTNG2Q96CW9 530 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 ISG20L2Q9H9L3 353 aaKnown RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 NKX6-3A6NJ46 265 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 CTDSPLO15194 276 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 SLC2A10O95528 541 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 KIR3DL2P43630 455 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 ERVS71-1P61550 626 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 RNASEKQ6P5S7 137 aaKnown RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 TSEN54Q7Z6J9 526 aaKnown RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 ADAMTS17Q8TE56 1095 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 LHX9Q9NQ69 397 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 RNF186Q9NXI6 227 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 CDC42EP3Q9UKI2 254 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 CA3P07451 260 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 SBK3P0C264 359 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 TRGC1P0CF51 173 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 CD22P20273 847 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 CSN1S1P47710 185 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 DCAF12Q5T6F0 453 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 MVB12AQ96EY5 273 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 THAP10Q9P2Z0 257 aaPredicted RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 OR51B4Q9Y5P0 310 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 ZSWIM8A7E2V4 1837 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 SCRG1O75711 98 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 RBPJQ06330 500 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 PPP1R1AQ13522 171 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 PRTGQ2VWP7 1150 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 NUFIP2Q7Z417 695 aaKnown RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 EDARADDQ8WWZ3 215 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 ARSGQ96EG1 525 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 SFRP2Q96HF1 295 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 EGLN1Q9GZT9 426 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 FBXO4Q9UKT5 387 aa5.1□□□□□ -1.59
VCAN-201ENST00000265077 COA3Q9Y2R0 106 aaPredicted RBP5.1□□□□□ -1.59
VCAN-201ENST00000265077 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.09□□□□□ -1.59
VCAN-201ENST00000265077 HSD17B6O14756 317 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 BCAT2O15382 392 aaPredicted RBP5.09□□□□□ -1.59
VCAN-201ENST00000265077 ANKRD34CP0C6C1 535 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 OR51H1Q8NH63 302 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 NAT8BQ9UHF3 227 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 TMPRSS11DO60235 418 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 EN2P19622 333 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms