RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 DUX4Q9UBX2 424 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 WIPI2Q9Y4P8 454 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 KIAA2026Q5HYC2 2103 aa8.16□□□□□ -1.1
SNRNP40-201ENST00000263694 TRAV24A0A0B4J272 114 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 LRRC30A6NM36 301 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 OR2AT4A6NND4 320 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 SH2D1BO14796 132 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 WIPF1O43516 503 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 RP2O75695 350 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 OR2H2O95918 312 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 HAND1O96004 215 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 GYPAP02724 150 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 DAOP14920 347 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 ZNF44P15621 663 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 HIST1H1DP16402 221 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 AMY2BP19961 511 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 CHATP28329 748 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 RANBP1P43487 201 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 GABRA2P47869 451 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 ZNF45Q02386 682 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 CARTPTQ16568 116 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 BAK1Q16611 211 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 HFEQ30201 348 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 SMIM21Q3B7S5 101 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 NHLRC3Q5JS37 347 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 AVPI1Q5T686 147 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 RAB12Q6IQ22 244 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 FAM90A1Q86YD7 464 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 SUMF2Q8NBJ7 301 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 NUDCD2Q8WVJ2 157 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 NEDD4LQ96PU5 975 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 HDHD3Q9BSH5 251 aaPredicted RBP8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 RASL12Q9NYN1 266 aa8.15□□□□□ -1.1
SNRNP40-201ENST00000263694 ANKRD17O75179 2603 aaKnown RBP8.15□□□□□ -1.11
SNRNP40-201ENST00000263694 PPIAL4EA0A075B759 164 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 OOEPA6NGQ2 149 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PPIAL4DF5H284 164 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 SLC33A1O00400 549 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 MFNGO00587 321 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PSPNO60542 156 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PDCD6O75340 191 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 IGHV4-39P01824 125 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 CD3GP09693 182 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PPIAL4FP0DN26 164 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 SELLP14151 372 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 FUT3P21217 361 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PRDX2P32119 198 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 MNDAP41218 407 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PPP5CP53041 499 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 IFITM3Q01628 133 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 COL10A1Q03692 680 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 IL13RA2Q14627 380 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF146Q15072 292 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ZMYND11Q15326 602 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF181Q2M3W8 571 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PYHIN1Q6K0P9 492 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 OR8H2Q8N162 312 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 Q8N402 240 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 FGFRL1Q8N441 504 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 OR52I2Q8NH67 350 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ANGPTL6Q8NI99 470 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 NEU4Q8WWR8 484 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 MAFIPQ8WZ33 124 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 HPS1Q92902 700 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 CCL13Q99616 98 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 WDR12Q9GZL7 423 aaKnown RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 CHST6Q9GZX3 395 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 RHOFQ9HBH0 211 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 AK3Q9UIJ7 227 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PLEKHA6Q9Y2H5 1048 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PPIAL4AQ9Y536 164 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 NPTNQ9Y639 398 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 APCP25054 2843 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 A0A0A6YYH2 397 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 LINC00854A0A1B0GVQ3 168 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 TMEM82A0PJX8 343 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 A6NJ64 397 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 LGALS8O00214 317 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 SSX4O60224 188 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 SSX5O60225 188 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 KNG1P01042 644 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 CSF3P09919 207 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 CD40LGP29965 261 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 SSTR2P30874 369 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PRSS3P35030 304 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 NR4A2P43354 598 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 EFNA4P52798 201 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 MICBQ29980 383 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PAN3Q58A45 887 aaKnown RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 SPIN3Q5JUX0 258 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 FIP1L1Q6UN15 594 aaKnown RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 LYPD2Q6UXB3 125 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 C5orf24Q7Z6I8 188 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF525Q8N782 197 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 GVQW1Q8N7I0 195 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNRF1Q8ND25 227 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 OR4S1Q8NGB4 309 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PLPPR1Q8TBJ4 325 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 NEK7Q8TDX7 302 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms