RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CRLF2Q9HC73 371 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
SNX1-201ENST00000261889 STARD10Q9Y365 291 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 PPIHO43447 177 aaKnown RBP11.27□□□□□ -0.6
SNX1-201ENST00000261889 DANCRP0C864 163 aa11.27□□□□□ -0.6
SNX1-201ENST00000261889 COL8A2P25067 703 aa11.27□□□□□ -0.6
SNX1-201ENST00000261889 DLK1P80370 383 aa11.27□□□□□ -0.6
SNX1-201ENST00000261889 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.6
SNX1-201ENST00000261889 OR1K1Q8NGR3 316 aa11.27□□□□□ -0.6
SNX1-201ENST00000261889 OR51H1Q8NH63 302 aa11.27□□□□□ -0.6
SNX1-201ENST00000261889 OR51M1Q9H341 326 aa11.27□□□□□ -0.6
SNX1-201ENST00000261889 ALKBH4Q9NXW9 302 aa11.27□□□□□ -0.6
SNX1-201ENST00000261889 GNG13Q9P2W3 67 aa11.27□□□□□ -0.6
SNX1-201ENST00000261889 CEP192Q8TEP8 1941 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 TDGF1P13385 188 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 FASLGP48023 281 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 RPS18P62269 152 aaKnown RBP11.27□□□□□ -0.61
SNX1-201ENST00000261889 ZXDAP98168 799 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 THEM4Q5T1C6 240 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 DOK3Q7L591 496 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 OR10AD1Q8NGE0 317 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 SLC35B3Q9H1N7 401 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 GLRX2Q9NS18 164 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 MMACHCQ9Y4U1 282 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 TPRP12270 2363 aaKnown RBP11.27□□□□□ -0.61
SNX1-201ENST00000261889 CRYM-AS1A6NIL9 109 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 TNFSF11O14788 317 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 SCAF4O95104 1147 aaKnown RBP11.27□□□□□ -0.61
SNX1-201ENST00000261889 TMEM50AO95807 157 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 IGHV2-5P01817 119 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 RAB11AP62491 216 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 EWSR1Q01844 656 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX1-201ENST00000261889 SLC25A24Q6NUK1 477 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 SYT13Q7L8C5 426 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 THOC3Q96J01 351 aaKnown RBP11.27□□□□□ -0.61
SNX1-201ENST00000261889 ZNF488Q96MN9 340 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 IER2Q9BTL4 223 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 RSG1Q9BU20 258 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 VSIRQ9H7M9 311 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 TUBA4BQ9H853 241 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 CRIM1Q9NZV1 1036 aa11.27□□□□□ -0.61
SNX1-201ENST00000261889 ADAM20O43506 726 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 CD55P08174 381 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 NTF4P34130 210 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 ZNF107Q9UII5 783 aaPredicted RBP11.26□□□□□ -0.61
SNX1-201ENST00000261889 ST3GAL6Q9Y274 331 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 BORCS7-ASMTA0A0B4J1R7 106 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 WRBO00258 174 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 ZNF16P17020 682 aaPredicted RBP11.26□□□□□ -0.61
SNX1-201ENST00000261889 TMEM187Q14656 261 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 PRSS8Q16651 343 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 DEGS2Q6QHC5 323 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 OPN5Q6U736 354 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 ANKRD37Q7Z713 158 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 ZNF441Q8N8Z8 693 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 NAA60Q9H7X0 242 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 RNF122Q9H9V4 155 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 SEBOXQ9HB31 216 aaPredicted RBP11.26□□□□□ -0.61
SNX1-201ENST00000261889 DNAJB11Q9UBS4 358 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 KCNIP3Q9Y2W7 256 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 UBE2J1Q9Y385 318 aaPredicted RBP11.26□□□□□ -0.61
SNX1-201ENST00000261889 HDGFL3Q9Y3E1 203 aa11.26□□□□□ -0.61
SNX1-201ENST00000261889 A0A1W2PQD3 144 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 IGHMP01871 453 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 TBPP20226 339 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 GNRHRP30968 328 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 ZNF574Q6ZN55 896 aaPredicted RBP11.25□□□□□ -0.61
SNX1-201ENST00000261889 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 S100A8P05109 93 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 SNRPCP09234 159 aaKnown RBP11.25□□□□□ -0.61
SNX1-201ENST00000261889 IAPPP10997 89 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 S100A2P29034 98 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 GPX4P36969 197 aaPredicted RBP11.25□□□□□ -0.61
SNX1-201ENST00000261889 DYNLT3P51808 116 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 TMPRSS7Q7RTY8 843 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 YRDCQ86U90 279 aaKnown RBP11.25□□□□□ -0.61
SNX1-201ENST00000261889 OR1J1Q8NGS3 322 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 HPSE2Q8WWQ2 592 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 IL1F10Q8WWZ1 152 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 METTL1Q9UBP6 276 aaKnown RBP11.25□□□□□ -0.61
SNX1-201ENST00000261889 POLEQ07864 2286 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 A0A096LPE4 126 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 IGHV1OR15-9A0A0B4J2B8 117 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 A0A1W2PPZ6 126 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 ST8SIA3O43173 380 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 MPZP25189 248 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 ELLP55199 621 aaPredicted RBP11.25□□□□□ -0.61
SNX1-201ENST00000261889 SCGB3A2Q96PL1 93 aa11.25□□□□□ -0.61
SNX1-201ENST00000261889 DMXL1Q9Y485 3027 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 E5RGE8 158 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 ZNF587BE7ETH6 402 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 DHRS3O75911 302 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 SCTP09683 121 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 CHATP28329 748 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 DCAF7P61962 342 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 EIF5AP63241 154 aaKnown RBP11.24□□□□□ -0.61
SNX1-201ENST00000261889 MRPS34P82930 218 aaKnown RBP11.24□□□□□ -0.61
SNX1-201ENST00000261889 DEFA6Q01524 100 aa11.24□□□□□ -0.61
SNX1-201ENST00000261889 ENDOGQ14249 297 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms