RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MMP25Q9NPA2 562 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 DYRK2Q92630 601 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 OR2A5Q96R48 311 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 AKIP1Q9NQ31 210 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 MPZL1O95297 269 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 RPS4Y1P22090 263 aaKnown RBP12.68□□□□□ -0.38
CUX2-201ENST00000261726 Q7L0L9 218 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 OR8A1Q8NGG7 326 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 KCNK15Q9H427 330 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 R4GN57 208 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 GSTZ1O43708 216 aaPredicted RBP12.68□□□□□ -0.38
CUX2-201ENST00000261726 NDUFB6O95139 128 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 METAP1P53582 386 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 C3AR1Q16581 482 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 RAB1CQ92928 201 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 MAP6Q96JE9 813 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 SMOC1Q9H4F8 434 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 LILRA5A6NI73 299 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 DHRS2Q13268 280 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 ACER2Q5QJU3 275 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 WDR73Q6P4I2 378 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 CD3EP07766 207 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 SPINK14Q6IE38 97 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 GVQW1Q8N7I0 195 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 ASCL3Q9NQ33 180 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 SEMA7AO75326 666 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 HPXP02790 462 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 PSG5Q15238 335 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 NHLRC1Q6VVB1 395 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 LINC00299Q6ZSB3 139 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 LPAR2Q9HBW0 351 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 A0A0B4J2E0 115 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 A0A1B0GX12 115 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 M0R3E3 92 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 KLK8O60259 260 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 P01737 135 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 FOXO1Q12778 655 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 TMEM211Q6ICI0 200 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 BHLHA15Q7RTS1 189 aaPredicted RBP12.67□□□□□ -0.38
CUX2-201ENST00000261726 D2HGDHQ8N465 521 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 OR2C3Q8N628 320 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 CNTD2Q9H8S5 307 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 AGFG2O95081 481 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
CUX2-201ENST00000261726 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 NUFIP2Q7Z417 695 aaKnown RBP12.67□□□□□ -0.38
CUX2-201ENST00000261726 TBC1D26Q86UD7 250 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 LINC00615Q96LM1 132 aaPredicted RBP12.67□□□□□ -0.38
CUX2-201ENST00000261726 NPAS1Q99742 590 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 ZNF426Q9BUY5 554 aa12.67□□□□□ -0.38
CUX2-201ENST00000261726 IGHV5-51A0A0C4DH38 117 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 TAS2R60P59551 318 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 HES3Q5TGS1 186 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 OR4P4Q8NGL7 312 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 TMEM174Q8WUU8 243 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 R3HDM4Q96D70 268 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 FSCN3Q9NQT6 498 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 A0A1B0GTL3 188 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 SOX8P57073 446 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 ELOBQ15370 118 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 ARL6IP6Q8N6S5 226 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 ABHD3Q8WU67 409 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 PHYHIPLQ96FC7 376 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 TMUB1Q9BVT8 246 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 QSER1Q2KHR3 1735 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 KCNAB3O43448 404 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 MPLP40238 635 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 ANKRD33Q7Z3H0 272 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 SSMEM1Q8WWF3 244 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 LIPGQ9Y5X9 500 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 IGHV3-21A0A0B4J1V1 117 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 OR5B21A6NL26 309 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 CTAG2O75638 210 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
CUX2-201ENST00000261726 MRPS11P82912 194 aaKnown RBP12.66□□□□□ -0.38
CUX2-201ENST00000261726 SSX1Q16384 188 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 TSPO2Q5TGU0 170 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 MUC15Q8N387 334 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 OR10A7Q8NGE5 316 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 OR8D4Q8NGM9 314 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 OR6C3Q9NZP0 311 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 TMSB15BA0A087X1C1 80 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 DUXBA0A1W2PPF3 345 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 BRS3P32247 399 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 RNF165Q6ZSG1 346 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 OR4S2Q8NH73 311 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 FBXL17Q9UF56 701 aa12.66□□□□□ -0.38
CUX2-201ENST00000261726 IGLV3-27P01718 113 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 GABRG3Q99928 467 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 SIGLEC7Q9Y286 467 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 GLULP15104 373 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 PRSS41Q7RTY9 318 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 SCMH1Q96GD3 660 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 ZNF764Q96H86 408 aaPredicted RBP12.65□□□□□ -0.38
CUX2-201ENST00000261726 HLA-DRB5Q30154 266 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 MRPL54Q6P161 138 aaKnown RBP12.65□□□□□ -0.38
CUX2-201ENST00000261726 TRAV38-1A0A0B4J264 116 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 COL8A1P27658 744 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 ECSCRQ19T08 205 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms