RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 METTL8Q9H825 291 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 OR5AC2Q9NZP5 309 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 FZR1Q9UM11 496 aa12.67□□□□□ -0.38
TRAFD1-201ENST00000257604 SLC22A20A6NK97 555 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 H0YIZ8 118 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 GALR2O43603 387 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 CHRM2P08172 466 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 RAB6AP20340 208 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 MEOX2P50222 304 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 PPT1P50897 306 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 FAM3AP98173 230 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 HOXA4Q00056 320 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 PLP2Q04941 152 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 BAP18Q8IXM2 172 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 PRR18Q8N4B5 295 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 PECRQ9BY49 303 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 METTL9Q9H1A3 318 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 SPRR3Q9UBC9 169 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 TMEM127O75204 238 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 EIF3GO75821 320 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 PCBD1P61457 104 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 ABLIM2Q6H8Q1 611 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 OR2T2Q6IF00 324 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 PP6455Q8WZ26 134 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 ARL11Q969Q4 196 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 BIN3Q9NQY0 253 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 PLCE1Q9P212 2302 aa12.66□□□□□ -0.38
TRAFD1-201ENST00000257604 ZGRF1Q86YA3 2104 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 LILRA1O75019 489 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 ZNF708P17019 499 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 SP6Q3SY56 376 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 KRBOX4Q5JUW0 171 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 MITD1Q8WV92 249 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 C14orf79Q96F83 325 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 UQCC1Q9NVA1 299 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 SH3BGRL2Q9UJC5 107 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 TRAV39A0A0B4J263 110 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 A0A0U1RQV5 110 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 OR6C6A6NF89 314 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 PRSS44E7EML9 344 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 EFSO43281 561 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 SCGB1D2O95969 90 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 CRHP06850 196 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 CELA3BP08861 270 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 TPT1P13693 172 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 CRYGSP22914 178 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 CPT2P23786 658 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 CEBPGP53567 150 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 MEF2DQ14814 521 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 C17orf78Q8N4C9 275 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 ZNF611Q8N823 705 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 HS3ST6Q96QI5 342 aa12.65□□□□□ -0.38
TRAFD1-201ENST00000257604 IGKV1-12A0A0C4DH73 117 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 DHRS7CA6NNS2 312 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 C9JQL5 133 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 AGFG2O95081 481 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 IGKV1D-12P01611 117 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 CD74P04233 296 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 MUC1P15941 1255 aaPredicted RBP12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 PHLDA2Q53GA4 152 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 CXorf67Q86X51 503 aaPredicted RBP12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 GLYATL2Q8WU03 294 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 SFT2D1Q8WV19 159 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 PHYHIPLQ96FC7 376 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 ZNF2Q9BSG1 426 aaPredicted RBP12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 RNF126Q9BV68 326 aa12.65□□□□□ -0.39
TRAFD1-201ENST00000257604 TEX13DA0A0J9YY54 714 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 A0A1W2PPE3 182 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 F8VVB4 439 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 F8VWA3 439 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 LRP3O75074 770 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 SNRNP70P08621 437 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 BCL2L14Q9BZR8 327 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 HS3ST1O14792 307 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 OR2B8PP59922 312 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 ERVS71-1P61550 626 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 AVPI1Q5T686 147 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 LPCAT3Q6P1A2 487 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 UQCC3Q6UW78 93 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 RNF141Q8WVD5 230 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 AKR1E2Q96JD6 320 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 SULT4A1Q9BR01 284 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 NIT2Q9NQR4 276 aa12.64□□□□□ -0.39
TRAFD1-201ENST00000257604 NME2P1O60361 137 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 MED6O75586 246 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 MELTFP08582 738 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 ASCL1P50553 236 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 CNN3Q15417 329 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 FAM180AQ6UWF9 173 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 TERB2Q8NHR7 220 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 CLCC1Q96S66 551 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 RPS10P5Q9NQ39 176 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 ZFP57Q9NU63 452 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 AK3Q9UIJ7 227 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 V9GYS6 101 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 KIAA1549Q9HCM3 1950 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 SNAPINO95295 136 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 H2AFB1P0C5Y9 115 aa12.63□□□□□ -0.39
TRAFD1-201ENST00000257604 CA6P23280 308 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms