RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 BCO1Q9HAY6 547 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 TMEM100Q9NV29 134 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 IGLV3-12A0A075B6K2 115 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 C5orf49A4QMS7 147 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 CRYM-AS1A6NIL9 109 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 ZNF727A8MUV8 499 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 DVL1P1P54792 670 aaPredicted RBP11.71□□□□□ -0.53
VHL-201ENST00000256474 EIF2S3LQ2VIR3 472 aaKnown RBP11.71□□□□□ -0.53
VHL-201ENST00000256474 CXorf66Q5JRM2 361 aaPredicted RBP11.71□□□□□ -0.53
VHL-201ENST00000256474 NCMAPQ5T1S8 102 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 ZIC4Q8N9L1 334 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 DUSP23Q9BVJ7 150 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 C19orf12Q9NSK7 152 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 DNAJB11Q9UBS4 358 aa11.71□□□□□ -0.53
VHL-201ENST00000256474 A0A1W2PR80 420 aa11.71□□□□□ -0.54
VHL-201ENST00000256474 E5RGE8 158 aa11.71□□□□□ -0.54
VHL-201ENST00000256474 MPZP25189 248 aa11.71□□□□□ -0.54
VHL-201ENST00000256474 FOLR3P41439 243 aa11.71□□□□□ -0.54
VHL-201ENST00000256474 SUCLG1P53597 346 aaKnown RBP11.71□□□□□ -0.54
VHL-201ENST00000256474 FABP9Q0Z7S8 132 aa11.71□□□□□ -0.54
VHL-201ENST00000256474 DHRS7BQ6IAN0 325 aaPredicted RBP11.71□□□□□ -0.54
VHL-201ENST00000256474 NSG2Q9Y328 171 aa11.71□□□□□ -0.54
VHL-201ENST00000256474 MSTNO14793 375 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 UMODP07911 640 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 CLDN15P56746 228 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 RPS16P62249 146 aaKnown RBP11.7□□□□□ -0.54
VHL-201ENST00000256474 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 LGI3Q8N145 548 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 AGBL5Q8NDL9 886 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 SGCZQ96LD1 299 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 HS3ST6Q96QI5 342 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 ATPIF1Q9UII2 106 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 DOCK10Q96BY6 2186 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 APOC1P02654 83 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 CD63P08962 238 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 LINC00696Q6ZRV3 163 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 SKA3Q8IX90 412 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 SAT2Q96F10 170 aaPredicted RBP11.7□□□□□ -0.54
VHL-201ENST00000256474 SLC7A10Q9NS82 523 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 GHRLQ9UBU3 117 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 LINC01387J3KSC0 135 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 TAAR5O14804 337 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 ADAM20O43506 726 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 SCTP09683 121 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 FOXG1P55316 489 aaPredicted RBP11.7□□□□□ -0.54
VHL-201ENST00000256474 DNASE2BQ8WZ79 361 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 SMIM8Q96KF7 97 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
VHL-201ENST00000256474 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
VHL-201ENST00000256474 A0A0U1RQV5 110 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 NKX2-1P43699 371 aaPredicted RBP11.69□□□□□ -0.54
VHL-201ENST00000256474 MEOX2P50222 304 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 ZNF528Q3MIS6 628 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 SOHLH1Q5JUK2 328 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 TMEM123Q8N131 208 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 SUMF2Q8NBJ7 301 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 EXTL1Q92935 676 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 C12orf49Q9H741 205 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 FANCFQ9NPI8 374 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 PRR14LQ5THK1 2151 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 IGHV1-45A0A0A0MS14 117 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 ARL6IP1Q15041 203 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 HES7Q9BYE0 225 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 HSPA12AO43301 675 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 MRPL33O75394 65 aaKnown RBP11.69□□□□□ -0.54
VHL-201ENST00000256474 CCL20P78556 96 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 FAM86C1Q9NVL1 165 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 PLA2G3Q9NZ20 509 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 PISDQ9UG56 409 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 V9GYS6 101 aa11.69□□□□□ -0.54
VHL-201ENST00000256474 C10orf142B7Z368 130 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 CBR3O75828 277 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 VAMP5O95183 116 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 PPYP01298 95 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 COX6A1P12074 109 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 BCL3P20749 454 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 CCL1P22362 96 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 CHATP28329 748 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 RAC1P63000 192 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 TMEM187Q14656 261 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 BTNL8Q6UX41 500 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 MRPL21Q7Z2W9 205 aaKnown RBP11.68□□□□□ -0.54
VHL-201ENST00000256474 FADS6Q8N9I5 356 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 OR5C1Q8NGR4 320 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 NOSIPQ9Y314 301 aaKnown RBP11.68□□□□□ -0.54
VHL-201ENST00000256474 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 ROS1P08922 2347 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 RAB35Q15286 201 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 SLC25A53Q5H9E4 307 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 TBC1D26Q86UD7 250 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 CARFQ8N187 725 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 SAP25Q8TEE9 199 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 TMEM38BQ9NVV0 291 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 KCNS2Q9ULS6 477 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 KPTNQ9Y664 436 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 CPAMD8Q8IZJ3 1885 aa11.68□□□□□ -0.54
VHL-201ENST00000256474 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms