RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ENTPD6O75354 484 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 IGLV1-47P01700 117 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 ALDOBP05062 364 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 UBCP0CG48 685 aaKnown RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 CD34P28906 385 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 ERP29P30040 261 aaKnown RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 HTR1FP30939 366 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 VDAC2P45880 294 aaPredicted RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 NPBWR2P48146 333 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 P2RX3P56373 397 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 OR12D2P58182 307 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 BDH1Q02338 343 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 SLC34A1Q06495 639 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 DYNC1I2Q13409 638 aaKnown RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 EDDM3AQ14507 147 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 GRK1Q15835 563 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 ODF4Q2M2E3 257 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 SPIN3Q5JUX0 258 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 FOXB2Q5VYV0 432 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 UTS2BQ765I0 119 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 C16orf82Q7Z2V1 217 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 ENTHD1Q8IYW4 607 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 ZNF676Q8N7Q3 588 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 MRAPQ8TCY5 172 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 EMG1Q92979 244 aaKnown RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 ADAT3Q96EY9 351 aaPredicted RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 BORCS8Q96FH0 119 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 OR5M11Q96RB7 305 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 TBX5Q99593 518 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 CLEC7AQ9BXN2 247 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 GABARAPL3Q9BY60 117 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 CHST6Q9GZX3 395 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 H2AFY2Q9P0M6 372 aaPredicted RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 UBE2J1Q9Y385 318 aaPredicted RBP8.24□□□□□ -1.09
VPS50-201ENST00000251739 HILPDAQ9Y5L2 63 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 RYR3Q15413 4870 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 IGKV1-12A0A0C4DH73 117 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 H3BSH0 61 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 APOL3O95236 402 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 BPNT1O95861 308 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 IGKV1D-12P01611 117 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 AMY1AP04745 511 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 AMY2AP04746 511 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 BCL3P20749 454 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 HTR1DP28221 377 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 PEX2P28328 305 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 DUSP1P28562 367 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 POLR2IP36954 125 aaKnown RBP8.23□□□□□ -1.09
VPS50-201ENST00000251739 RBP2P50120 134 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 ZNF85Q03923 595 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 TMED1Q13445 227 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 IL18R1Q13478 541 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 BAIAP2L2Q6UXY1 529 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 HEPN1Q6WQI6 88 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 ZBTB49Q6ZSB9 765 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 FAM58AQ8N1B3 248 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 NDNFQ8TB73 568 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 CIB1Q99828 191 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 COMMD4Q9H0A8 199 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 HMG20AQ9NP66 347 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 ENOPH1Q9UHY7 261 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 HHLA2Q9UM44 414 aa8.23□□□□□ -1.09
VPS50-201ENST00000251739 G3V2T6 193 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 J3QRE1 110 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 K7EIL1 84 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 INMTO95050 263 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 ISG15P05161 165 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 CSN2P05814 226 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 IGLL1P15814 213 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 GABRR1P24046 479 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 LMO1P25800 156 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 GDNFP39905 211 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 ATP1B3P54709 279 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 NANOS3P60323 173 aaKnown RBP8.22□□□□□ -1.09
VPS50-201ENST00000251739 CDC42P60953 191 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 RNF144BQ7Z419 303 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 RDH10Q8IZV5 341 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 OR10H4Q8NGA5 316 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 OR5AU1Q8NGC0 362 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 OR8J1Q8NGP2 316 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 OR2G2Q8NGZ5 317 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 SGCDQ92629 289 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 CORO2AQ92828 525 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 EME1Q96AY2 570 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 SPSB1Q96BD6 273 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 MBOAT4Q96T53 435 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 DPM3Q9P2X0 92 aa8.22□□□□□ -1.09
VPS50-201ENST00000251739 A0A087X0M5 115 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 A0A1B0GX30 115 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 E9PQ18 207 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 LY6LH3BQJ8 138 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 SIRPB1O00241 398 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 PEX14O75381 377 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 KDM4BO94953 1096 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 OR2F2O95006 317 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 OR2H2O95918 312 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 SERPINA3P01011 423 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 MT-ND2P03891 347 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 PRKACAP17612 351 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms