RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ST3GAL6Q9Y274 331 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 A0A096LPE4 126 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 A0A1W2PPZ6 126 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 SS18L1O75177 396 aaPredicted RBP18.89■□□□□ 0.61
RNF39-201ENST00000244360 PDCD6O75340 191 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 MUC1P15941 1255 aaPredicted RBP18.89■□□□□ 0.61
RNF39-201ENST00000244360 DAZAP2Q15038 168 aaPredicted RBP18.89■□□□□ 0.61
RNF39-201ENST00000244360 RNPS1Q15287 305 aaKnown RBP18.89■□□□□ 0.61
RNF39-201ENST00000244360 TMEM200AQ86VY9 491 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 CBLN2Q8IUK8 224 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 LIME1Q9H400 295 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 TMEM231Q9H6L2 316 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 KCNIP3Q9Y2W7 256 aa18.89■□□□□ 0.61
RNF39-201ENST00000244360 ZNF503-AS2A6NEH8 195 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 ZNF850A8MQ14 1090 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 HLA-HP01893 362 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 RRADP55042 308 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 C9orf135Q5VTT2 229 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 BTNL8Q6UX41 500 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 CALHM1Q8IU99 346 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 ADAT1Q9BUB4 502 aaKnown RBP18.88■□□□□ 0.61
RNF39-201ENST00000244360 TMEM9BQ9NQ34 198 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 PQLC2LA1A4F0 135 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 RNASEK-C17orf49H0YIS7 233 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 PRKACAP17612 351 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 OPRM1P35372 400 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 LPAR6P43657 344 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 GGNBP1Q5YKI7 109 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 ZFP62Q8NB50 900 aaPredicted RBP18.88■□□□□ 0.61
RNF39-201ENST00000244360 OR56B2PQ8NGI1 322 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 PRRG4Q9BZD6 226 aa18.88■□□□□ 0.61
RNF39-201ENST00000244360 FBXO24O75426 580 aa18.87■□□□□ 0.61
RNF39-201ENST00000244360 FCGR2CP31995 323 aa18.87■□□□□ 0.61
RNF39-201ENST00000244360 NPBWR1P48145 328 aa18.87■□□□□ 0.61
RNF39-201ENST00000244360 HOXA1P49639 335 aaPredicted RBP18.87■□□□□ 0.61
RNF39-201ENST00000244360 FOXRED2Q8IWF2 684 aa18.87■□□□□ 0.61
RNF39-201ENST00000244360 ZNF611Q8N823 705 aa18.87■□□□□ 0.61
RNF39-201ENST00000244360 KLRC4-KLRK1H3BQV0 150 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 CD5P06127 495 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 DYRK2Q92630 601 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 APOBEC3DQ96AK3 386 aaPredicted RBP18.86■□□□□ 0.61
RNF39-201ENST00000244360 FBXL17Q9UF56 701 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 ARR3P36575 388 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 MALLQ13021 153 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 UBAC2Q8NBM4 344 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 GALNT14Q96FL9 552 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 FAM96BQ9Y3D0 163 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 FREM1Q5H8C1 2179 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 MED13Q9UHV7 2174 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 KNTC1P50748 2209 aa18.86■□□□□ 0.61
RNF39-201ENST00000244360 C5orf49A4QMS7 147 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A10PA6NDY2 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A18PA6NE21 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A16PA6NEW6 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A20PA6NIJ5 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A8PA6NJQ4 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A7PA6NKC0 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A22PA8MWA6 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A12PA8MX19 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A5PA8MXJ8 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A23PA8MXZ1 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 SFTA3P0C7M3 94 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A15PP0C7V4 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A13PP0C7W8 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A14PP0C7W9 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FAM90A24PP0C7X0 464 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 RCC1P18754 421 aaPredicted RBP18.85■□□□□ 0.61
RNF39-201ENST00000244360 RAB13P51153 203 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 SPEM2Q0P670 501 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 HMGN3Q15651 99 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 SWI5Q1ZZU3 235 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 OR2A2Q6IF42 318 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 SLC25A26Q70HW3 274 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 SAXO1Q8IYX7 474 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 NAXEQ8NCW5 288 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 MARS2Q96GW9 593 aaKnown RBP18.85■□□□□ 0.61
RNF39-201ENST00000244360 SUCNR1Q9BXA5 334 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FGF23Q9GZV9 251 aaPredicted RBP18.85■□□□□ 0.61
RNF39-201ENST00000244360 NAA60Q9H7X0 242 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 E5RGE8 158 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 FUT3P21217 361 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 DVL1P1P54792 670 aaPredicted RBP18.85■□□□□ 0.61
RNF39-201ENST00000244360 PIGPP57054 158 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 PRDX4Q13162 271 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 TMEM211Q6ICI0 200 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 NUFIP2Q7Z417 695 aaKnown RBP18.85■□□□□ 0.61
RNF39-201ENST00000244360 COMMD1Q8N668 190 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 LRTM2Q8N967 370 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 LYPD6BQ8NI32 183 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 MRPL24Q96A35 216 aaKnown RBP18.85■□□□□ 0.61
RNF39-201ENST00000244360 POM121L2Q96KW2 1035 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 PAPOLGQ9BWT3 736 aaKnown RBP18.85■□□□□ 0.61
RNF39-201ENST00000244360 ZNF286AQ9HBT8 521 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 BIN3Q9NQY0 253 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 AMDHD2Q9Y303 409 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 NSG2Q9Y328 171 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 LIPGQ9Y5X9 500 aa18.85■□□□□ 0.61
RNF39-201ENST00000244360 ZNF728P0DKX0 622 aa18.84■□□□□ 0.61
RNF39-201ENST00000244360 TMEM33P57088 247 aa18.84■□□□□ 0.61
RNF39-201ENST00000244360 C3AR1Q16581 482 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms