RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 PATE1Q8WXA2 126 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 MYH1P12882 1939 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 MYH4Q9Y623 1939 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 KNL1Q8NG31 2342 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 MS4A18H0YCH9 400 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 LANCL1O43813 399 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 MS4A18Q3C1V0 323 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 ALKBH6Q3KRA9 238 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 RGS7BPQ6MZT1 257 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-201ENST00000240185 SPACA9Q96E40 222 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-201ENST00000240185 MMP25Q9NPA2 562 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 RCC2Q9P258 522 aaKnown RBP12.32□□□□□ -0.44
TARDBP-201ENST00000240185 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 CTDSPLO15194 276 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 GCGP01275 180 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 TUSC5Q8IXB3 177 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 ADAMTS17Q8TE56 1095 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
TARDBP-201ENST00000240185 RNF186Q9NXI6 227 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 ADAMTS5Q9UNA0 930 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 COL2A1P02458 1487 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-201ENST00000240185 TMEM238LA0A1B0GVL6 79 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 A6NJY4 79 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 COX6CP09669 75 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 ZNF137PP52743 207 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 SURF2Q15527 256 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-201ENST00000240185 TMEM208Q9BTX3 173 aa12.32□□□□□ -0.44
TARDBP-201ENST00000240185 KLF13Q9Y2Y9 288 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-201ENST00000240185 NDUFB3O43676 98 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 SRSF10O75494 262 aaKnown RBP12.31□□□□□ -0.44
TARDBP-201ENST00000240185 FMODQ06828 376 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 OR4B1Q8NGF8 309 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 HES7Q9BYE0 225 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-201ENST00000240185 A0A0B4J2E0 115 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 A0A1B0GX12 115 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 ASPDHA6ND91 283 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 RER1O15258 196 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 MRPL58Q14197 206 aaKnown RBP12.31□□□□□ -0.44
TARDBP-201ENST00000240185 GUCA2BQ16661 112 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 LRRC10Q5BKY1 277 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 ARL6IP6Q8N6S5 226 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 RGPD5Q99666 1765 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 C5P01031 1676 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 MFSD2BA6NFX1 497 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 H7C2G1 150 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 SGMS2Q8NHU3 365 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 MS4A4AQ96JQ5 239 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 CXCL16Q9H2A7 254 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 TRBV23-1A0A0A0MS06 115 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 H0Y8X5 98 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 PWWP2BQ6NUJ5 590 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 C16orf82Q7Z2V1 217 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 TBC1D26Q86UD7 250 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 SSMEM1Q8WWF3 244 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-201ENST00000240185 ZNF275Q9NSD4 429 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-201ENST00000240185 UQCR10Q9UDW1 63 aa12.31□□□□□ -0.44
TARDBP-201ENST00000240185 ELF5Q9UKW6 265 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-201ENST00000240185 A0A1B0GV72 72 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 ZBTB42B2RXF5 422 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 HAND1O96004 215 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 TRGC2P03986 189 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 DPTQ07507 201 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 ZNF770Q6IQ21 691 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-201ENST00000240185 ZNF841Q6ZN19 808 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 ZNF502Q8TBZ5 544 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SARAFQ96BY9 339 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 NRIP2Q9BQI9 281 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 WDR13Q9H1Z4 485 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SOX21Q9Y651 276 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-201ENST00000240185 PRRG2O14669 202 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SPRY3O43610 288 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 ABLIM3O94929 683 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 HIST1H1EP10412 219 aaKnown RBP12.3□□□□□ -0.44
TARDBP-201ENST00000240185 VDAC1P21796 283 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 HOXA6P31267 233 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 EWSR1Q01844 656 aaKnown RBP eCLIP12.3□□□□□ -0.44
TARDBP-201ENST00000240185 DEGS2Q6QHC5 323 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SARGQ9BW04 601 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 IGHV3-43A0A0B4J1X8 118 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 OR2W5A6NFC9 320 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 PLA2G10O15496 165 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SEC11BP0C7V7 166 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 IGHV3-43DP0DP04 118 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SUMO3P55854 103 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-201ENST00000240185 TMEM65Q6PI78 240 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 LINC00518Q8N0U6 118 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SPPL3Q8TCT6 385 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 HYAL3O43820 417 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-201ENST00000240185 TAS2R60P59551 318 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 SKP2Q13309 424 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 ZNF600Q6ZNG1 722 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 NPEPL1Q8NDH3 523 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 GRAMD2BQ96HH9 432 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 OR2J1Q9GZK6 312 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 GPR27Q9NS67 375 aa12.3□□□□□ -0.44
TARDBP-201ENST00000240185 A0A1B0GV90 55 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms