RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 C3AR1Q16581 482 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 MPV17LQ2QL34 196 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 FBXW9Q5XUX1 488 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 ZNF585AQ6P3V2 769 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 TFAP2EQ6VUC0 442 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 CCDC36Q8IYA8 594 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 TMEM178AQ8NBL3 297 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 OR1K1Q8NGR3 316 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 EXTL1Q92935 676 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 TOMM40LQ969M1 308 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 MRPL24Q96A35 216 aaKnown RBP13.89□□□□□ -0.19
UBE3D-201ENST00000237186 SLC2A9Q9NRM0 540 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 MTCH1Q9NZJ7 389 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 PRSS50Q9UI38 385 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 PCDHB10Q9UN67 800 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 ZNF175Q9Y473 711 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 OTOGLQ3ZCN5 2332 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 TRGV5A0A0B4J1U4 118 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 NUDT19A8MXV4 375 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 ZNF732B4DXR9 585 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 H7C1Q1 480 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 BET1O15155 118 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 ZNF766Q5HY98 468 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 LIAT1Q6ZQX7 453 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 OR5P3Q8WZ94 311 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 GTF3AQ92664 365 aaKnown RBP13.88□□□□□ -0.19
UBE3D-201ENST00000237186 SLAMF9Q96A28 289 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 MSI2Q96DH6 328 aaKnown RBP13.88□□□□□ -0.19
UBE3D-201ENST00000237186 C18orf12Q96KH6 178 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 HIST1H2AAQ96QV6 131 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 FAM86C1Q9NVL1 165 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 MPC1Q9Y5U8 109 aa13.88□□□□□ -0.19
UBE3D-201ENST00000237186 LRP3O75074 770 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 OR5AC1P0C628 307 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 APLNRP35414 380 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 WNT5AP41221 380 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 S100A10P60903 97 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 CLN3Q13286 438 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 TGIF1Q15583 401 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 RNFT1Q5M7Z0 435 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 LINC00596Q86U02 117 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 DEFB127Q9H1M4 99 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 PLK3Q9H4B4 646 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 LDAHQ9H6V9 325 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 ZNF552Q9H707 407 aaPredicted RBP13.87□□□□□ -0.19
UBE3D-201ENST00000237186 Q9N2K0 584 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 ARGFXA6NJG6 315 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 J3QW42 95 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 PPYP01298 95 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 AADACP22760 399 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 FXYD4P59646 89 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 ARG2P78540 354 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 TCF15Q12870 199 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 CCDC71LQ8N9Z2 235 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 OR5L1Q8NGL2 311 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 OR1S2Q8NGQ3 325 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 GLYATL2Q8WU03 294 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 NANOS1Q8WY41 292 aaKnown RBP13.87□□□□□ -0.19
UBE3D-201ENST00000237186 PRRX2Q99811 253 aa13.87□□□□□ -0.19
UBE3D-201ENST00000237186 ZNF629Q9UEG4 869 aaPredicted RBP13.87□□□□□ -0.19
UBE3D-201ENST00000237186 PCNX2A6NKB5 2137 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 SLC22A20A6NK97 555 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 OR5B21A6NL26 309 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 TRAPPC2LH3BP13 241 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 ZNF205O95201 554 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 GAPDHP04406 335 aaKnown RBP13.86□□□□□ -0.19
UBE3D-201ENST00000237186 RPL12P30050 165 aaKnown RBP13.86□□□□□ -0.19
UBE3D-201ENST00000237186 KCNJ3P48549 501 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 SMCO1Q147U7 214 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 ATP1A1-AS1Q5TC04 95 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 LDLRAD3Q86YD5 345 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 FAM185AQ8N0U4 392 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 LGI3Q8N145 548 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 HS3ST6Q96QI5 342 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 RIMS4Q9H426 269 aaPredicted RBP13.86□□□□□ -0.19
UBE3D-201ENST00000237186 PLEKHA2Q9HB19 425 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 ZFP57Q9NU63 452 aa13.86□□□□□ -0.19
UBE3D-201ENST00000237186 K7EPK0 472 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 GLAP06280 429 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 HERV-K104P61576 105 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 SP6Q3SY56 376 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 HIKESHIQ53FT3 197 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 EIF5AL1Q6IS14 154 aaKnown RBP13.85□□□□□ -0.19
UBE3D-201ENST00000237186 ZNF573Q86YE8 665 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 FAM71E2Q8N5Q1 922 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 TMED6Q8WW62 240 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 SAT2Q96F10 170 aaPredicted RBP13.85□□□□□ -0.19
UBE3D-201ENST00000237186 GMPPAQ96IJ6 420 aaPredicted RBP13.85□□□□□ -0.19
UBE3D-201ENST00000237186 SPACA1Q9HBV2 294 aa13.85□□□□□ -0.19
UBE3D-201ENST00000237186 TRBV6-6A0A0A6YYG2 114 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 ANKRD30BLA7E2S9 258 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 CDRT15L2A8MXV6 281 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 CTXN2P0C2S0 81 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 TNFSF10P50591 281 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 GNG3P63215 75 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 IGSF11Q5DX21 431 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 LYZL2Q7Z4W2 148 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 PRSS33Q8NF86 280 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms