RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 POLR2AP24928 1970 aaKnown RBP12.22□□□□□ -0.45
HCFC2-201ENST00000229330 CDS2O95674 445 aa12.22□□□□□ -0.45
HCFC2-201ENST00000229330 COX19Q49B96 90 aa12.22□□□□□ -0.45
HCFC2-201ENST00000229330 TMEM255AQ5JRV8 349 aa12.22□□□□□ -0.45
HCFC2-201ENST00000229330 SLC35E3Q7Z769 313 aa12.22□□□□□ -0.45
HCFC2-201ENST00000229330 ADAMTS17Q8TE56 1095 aa12.22□□□□□ -0.45
HCFC2-201ENST00000229330 ESRP2Q9H6T0 727 aaKnown RBP12.22□□□□□ -0.45
HCFC2-201ENST00000229330 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
HCFC2-201ENST00000229330 KCNE5Q9UJ90 142 aa12.22□□□□□ -0.45
HCFC2-201ENST00000229330 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 K7ERU9 68 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 SMAD4Q13485 552 aaKnown RBP12.21□□□□□ -0.45
HCFC2-201ENST00000229330 APH1AQ96BI3 265 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 LANCL2Q9NS86 450 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 TGIF2-C20orf24A0A0A6YYL0 155 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 CTSVO60911 334 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 CD99P14209 185 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 TMEM215Q68D42 235 aa12.21□□□□□ -0.45
HCFC2-201ENST00000229330 CISD2Q8N5K1 135 aaKnown RBP12.21□□□□□ -0.45
HCFC2-201ENST00000229330 LOC102724200A0A096LPH7 203 aaPredicted RBP12.21□□□□□ -0.46
HCFC2-201ENST00000229330 M0R2Z0 102 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 VDAC1P21796 283 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 BMP5P22003 454 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 RRADP55042 308 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 RPS4XP62701 263 aaKnown RBP12.21□□□□□ -0.46
HCFC2-201ENST00000229330 VN1R4Q7Z5H5 301 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 EIF4E3Q8N5X7 224 aaKnown RBP12.21□□□□□ -0.46
HCFC2-201ENST00000229330 MRPS18BQ9Y676 258 aaKnown RBP12.21□□□□□ -0.46
HCFC2-201ENST00000229330 IGHV3-15A0A0B4J1V0 119 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 SOX15O60248 233 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 SRFP11831 508 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 CBLN3Q6UW01 205 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 MVB12AQ96EY5 273 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 MRGPRX3Q96LB0 322 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 OR2A5Q96R48 311 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 QSER1Q2KHR3 1735 aa12.21□□□□□ -0.46
HCFC2-201ENST00000229330 ATAD5Q96QE3 1844 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 METTL12A8MUP2 240 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 SYNGR2O43760 224 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 DEDDO75618 318 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 PGA4P0DJD7 388 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 PGA5P0DJD9 388 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 B4GALT1P15291 398 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 PAFAH1B2P68402 229 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 PRSS41Q7RTY9 318 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 HOGA1Q86XE5 327 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 NHLRC2Q8NBF2 726 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 ZNF738Q8NE65 137 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 OR1F12Q8NHA8 337 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 PITX3O75364 302 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 PIAS2O75928 621 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 HSPB1P04792 205 aaKnown RBP12.2□□□□□ -0.46
HCFC2-201ENST00000229330 OR1L6Q8NGR2 347 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 OR11L1Q8NGX0 322 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 GALMQ96C23 342 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 SCN4AP35499 1836 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 A0A1B0GTQ1 180 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 LNP1A1A4G5 178 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 MMP16P51512 607 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 RPL24P83731 157 aaKnown RBP12.2□□□□□ -0.46
HCFC2-201ENST00000229330 NKAIN1Q4KMZ8 207 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 ATG4DQ86TL0 474 aaPredicted RBP12.2□□□□□ -0.46
HCFC2-201ENST00000229330 OR8B12Q8NGG6 310 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.2□□□□□ -0.46
HCFC2-201ENST00000229330 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 WNK3Q9BYP7 1800 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 LRRC37AA6NMS7 1700 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 TRBV5-5A0A0J9YX44 114 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 SHISA3A0PJX4 238 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 NKX2-6A6NCS4 301 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 RNF224P0DH78 156 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 HKR1P10072 659 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 BCL2P10415 239 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 OR3A1P47881 315 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 MYBPHQ13203 477 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
HCFC2-201ENST00000229330 ZNF707Q96C28 371 aaPredicted RBP12.2□□□□□ -0.46
HCFC2-201ENST00000229330 S1PR3Q99500 378 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 PRSS27Q9BQR3 290 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 WDR13Q9H1Z4 485 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 A0A1W2PPC1 479 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 DIRC3C9JPN6 131 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 BMPR1BO00238 502 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 NRG2O14511 850 aaPredicted RBP12.2□□□□□ -0.46
HCFC2-201ENST00000229330 C1QL1O75973 258 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 CD8AP01732 235 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 CCR5P51681 352 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 VAX1Q5SQQ9 334 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 DCAF12Q5T6F0 453 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 ZMIZ1Q9ULJ6 1067 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 KLHDC2Q9Y2U9 406 aa12.2□□□□□ -0.46
HCFC2-201ENST00000229330 H3BMH7 237 aa12.19□□□□□ -0.46
HCFC2-201ENST00000229330 KLK2P20151 261 aa12.19□□□□□ -0.46
HCFC2-201ENST00000229330 C1orf53Q5VUE5 145 aa12.19□□□□□ -0.46
HCFC2-201ENST00000229330 YRDCQ86U90 279 aaKnown RBP12.19□□□□□ -0.46
HCFC2-201ENST00000229330 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
HCFC2-201ENST00000229330 WFDC6Q9BQY6 131 aa12.19□□□□□ -0.46
HCFC2-201ENST00000229330 TMEM191AQ9H0A3 160 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms