RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 TBC1D28Q2M2D7 210 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 GCNT2Q8N0V5 402 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 PHYHIPLQ96FC7 376 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 TRIB1Q96RU8 372 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 MICU1Q9BPX6 476 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 OR51I2Q9H344 312 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 Q9N2K0 584 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 KCNMB2Q9Y691 235 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 URB1O60287 2271 aaKnown RBP16.36■□□□□ 0.21
YBX3-201ENST00000228251 POM121CA8CG34 1229 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 TRAPPC2LH3BP13 241 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 LUMP51884 338 aaPredicted RBP16.36■□□□□ 0.21
YBX3-201ENST00000228251 PIGPP57054 158 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 TMEM187Q14656 261 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 RTP5Q14D33 572 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 DEFB109BQ30KR1 87 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 BEX5Q5H9J7 111 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 OR2T2Q6IF00 324 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 LINC00596Q86U02 117 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 ZNF573Q86YE8 665 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 LRTM2Q8N967 370 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 INO80EQ8NBZ0 244 aaPredicted RBP16.36■□□□□ 0.21
YBX3-201ENST00000228251 STOML3Q8TAV4 291 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 GTF3AQ92664 365 aaKnown RBP16.36■□□□□ 0.21
YBX3-201ENST00000228251 RBPMSQ93062 196 aaKnown RBP16.36■□□□□ 0.21
YBX3-201ENST00000228251 SLC25A32Q9H2D1 315 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 NAA60Q9H7X0 242 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 OR5AC2Q9NZP5 309 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 ZNF891A8MT65 544 aaPredicted RBP16.35■□□□□ 0.21
YBX3-201ENST00000228251 KCNAB3O43448 404 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 HOXB5P09067 269 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 RBMXP38159 391 aaKnown RBP16.35■□□□□ 0.21
YBX3-201ENST00000228251 TGFBR3Q03167 851 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 FAM76BQ5HYJ3 339 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 HAGHLQ6PII5 290 aaPredicted RBP16.35■□□□□ 0.21
YBX3-201ENST00000228251 C9orf106Q8NAJ2 232 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 DCUN1D4Q92564 292 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 WNT2BQ93097 391 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 HIST1H2AAQ96QV6 131 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 RSRP1Q9BUV0 290 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 PLK3Q9H4B4 646 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 IFT22Q9H7X7 185 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 METTL8Q9H825 291 aaKnown RBP16.35■□□□□ 0.21
YBX3-201ENST00000228251 CYTL1Q9NRR1 136 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 SDHAF2Q9NX18 166 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 ASPMQ8IZT6 3477 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 CFAP47Q6ZTR5 3102 aa16.35■□□□□ 0.21
YBX3-201ENST00000228251 MSGN1A6NI15 193 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 I3L521 148 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 HOXB1P14653 301 aaPredicted RBP16.34■□□□□ 0.21
YBX3-201ENST00000228251 RAB32Q13637 225 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 IL13RA2Q14627 380 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 AQP10Q96PS8 301 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 TAAR6Q96RI8 345 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 ARPC5LQ9BPX5 153 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 OR51B6Q9H340 312 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 TUBD1Q9UJT1 453 aa16.34■□□□□ 0.21
YBX3-201ENST00000228251 SPENQ96T58 3664 aaKnown RBP16.34■□□□□ 0.21
YBX3-201ENST00000228251 TRBV6-6A0A0A6YYG2 114 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 CEACAM1P13688 526 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 AADACP22760 399 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 KCNJ3P48549 501 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 INO80CQ6PI98 192 aaPredicted RBP16.33■□□□□ 0.21
YBX3-201ENST00000228251 WDR86Q86TI4 376 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 CCDC28AQ8IWP9 274 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 SLC38A6Q8IZM9 456 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 TOMM40LQ969M1 308 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 COL25A1Q9BXS0 654 aaPredicted RBP16.33■□□□□ 0.21
YBX3-201ENST00000228251 BARX1Q9HBU1 254 aaPredicted RBP16.33■□□□□ 0.21
YBX3-201ENST00000228251 SLC2A9Q9NRM0 540 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 FAM86C1Q9NVL1 165 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 DNAJB11Q9UBS4 358 aa16.33■□□□□ 0.21
YBX3-201ENST00000228251 J3QT63 122 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 LYZL6O75951 148 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 CA6P23280 308 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 PPP1CBP62140 327 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 IGSF11Q5DX21 431 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 SPATA46Q5T0L3 261 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 PDZD9Q8IXQ8 264 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 EIF4E3Q8N5X7 224 aaKnown RBP16.33■□□□□ 0.2
YBX3-201ENST00000228251 WDR31Q8NA23 367 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 RELL2Q8NC24 303 aaPredicted RBP16.33■□□□□ 0.2
YBX3-201ENST00000228251 C1orf162Q8NEQ5 155 aaPredicted RBP16.33■□□□□ 0.2
YBX3-201ENST00000228251 RTN4IP1Q8WWV3 396 aaPredicted RBP16.33■□□□□ 0.2
YBX3-201ENST00000228251 MRPL24Q96A35 216 aaKnown RBP16.33■□□□□ 0.2
YBX3-201ENST00000228251 SARAFQ96BY9 339 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 ZNF488Q96MN9 340 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 ZNF471Q9BX82 626 aaPredicted RBP16.33■□□□□ 0.2
YBX3-201ENST00000228251 RHOFQ9HBH0 211 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 DLL3Q9NYJ7 618 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 DKK4Q9UBT3 224 aa16.33■□□□□ 0.2
YBX3-201ENST00000228251 A8MXK9 166 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 PPYP01298 95 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 GLAP06280 429 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 FGF2P09038 288 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 NBL1P41271 181 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 GLP1RP43220 463 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 IDH3GP51553 393 aaPredicted RBP16.32■□□□□ 0.2
YBX3-201ENST00000228251 FXYD4P59646 89 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 NAAAQ02083 359 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms