RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 OR4M1Q8NGD0 313 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 OR5T2Q8NGG2 359 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 RAB1CQ92928 201 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 PERPQ96FX8 193 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 SPACA1Q9HBV2 294 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 DIABLOQ9NR28 239 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 GLS2Q9UI32 602 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 MAB21L2Q9Y586 359 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 ARID1AO14497 2285 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 ITPR2Q14571 2701 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 TRAV24A0A0B4J272 114 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 NDUFS8O00217 210 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 DEGS1O15121 323 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 PDCD6O75340 191 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF737O75373 536 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 OR7C1O76099 320 aaPredicted RBP11.72□□□□□ -0.53
SEC61B-201ENST00000223641 HLA-DQB1P01920 261 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 MELTFP08582 738 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 CSF3P09919 207 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 FUT3P21217 361 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 BLVRBP30043 206 aaPredicted RBP11.72□□□□□ -0.53
SEC61B-201ENST00000223641 MDH2P40926 338 aaKnown RBP11.72□□□□□ -0.53
SEC61B-201ENST00000223641 CEBPDP49716 269 aaPredicted RBP11.72□□□□□ -0.53
SEC61B-201ENST00000223641 PDLIM4P50479 330 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
SEC61B-201ENST00000223641 IKZF1Q13422 519 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 PDCD1Q15116 288 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 KCNJ8Q15842 424 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF260Q3ZCT1 412 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 Q6ZTK2 550 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 MUC20Q8N307 709 aaPredicted RBP11.72□□□□□ -0.53
SEC61B-201ENST00000223641 CHST4Q8NCG5 386 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 DEFB108BQ8NET1 73 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 TIMD4Q96H15 378 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 DIRAS2Q96HU8 199 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 TMEM246Q9BRR3 403 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 SHARPINQ9H0F6 387 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 EXTL2Q9UBQ6 330 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 OR14J1Q9UGF5 321 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 KCNK7Q9Y2U2 307 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 POLQO75417 2590 aa11.72□□□□□ -0.53
SEC61B-201ENST00000223641 VWC2LB2RUY7 222 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 FAM25AB3EWG3 89 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 FAM25CB3EWG5 89 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 FAM25GB3EWG6 89 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 SLC33A1O00400 549 aaPredicted RBP11.71□□□□□ -0.53
SEC61B-201ENST00000223641 MFNGO00587 321 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 PPIHO43447 177 aaKnown RBP11.71□□□□□ -0.53
SEC61B-201ENST00000223641 PSPNO60542 156 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 GYPAP02724 150 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 INHBBP09529 407 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 HIST1H1DP16402 221 aaKnown RBP11.71□□□□□ -0.53
SEC61B-201ENST00000223641 PTBP1P26599 531 aaKnown RBP eCLIP11.71□□□□□ -0.533e-9■■■■■ 44.1
SEC61B-201ENST00000223641 NR4A2P43354 598 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 GPR6P46095 362 aaPredicted RBP11.71□□□□□ -0.53
SEC61B-201ENST00000223641 DSCR9P59020 149 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 PAX5Q02548 391 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 COL10A1Q03692 680 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 LSAMPQ13449 338 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 ARL6IP1Q15041 203 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 SHEQ5VZ18 495 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 C17orf107Q6ZR85 190 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 DCDC5Q6ZRR9 648 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF561Q8N587 486 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 C10orf105Q8TEF2 133 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 ST8SIA4Q92187 359 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 PHF21AQ96BD5 680 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 RAB3CQ96E17 227 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 ARHGAP5-AS1Q96IT6 56 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 GAFA1Q96PS6 74 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 PECRQ9BY49 303 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF665Q9H7R5 613 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 AKIP1Q9NQ31 210 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 RABL2AQ9UBK7 228 aaPredicted RBP11.71□□□□□ -0.53
SEC61B-201ENST00000223641 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 RABL2BQ9UNT1 228 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 V9GYH0 126 aa11.71□□□□□ -0.53
SEC61B-201ENST00000223641 TMEM82A0PJX8 343 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 K7N7A8 449 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 SIGLEC5O15389 551 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 CA11O75493 328 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 TFF1P04155 84 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 CSN2P05814 226 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 GSTP1P09211 210 aaKnown RBP11.7□□□□□ -0.54
SEC61B-201ENST00000223641 ZNF44P15621 663 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 TALDO1P37837 337 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 TAS2R20P59543 309 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 TMEM69Q5SWH9 247 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 AVPI1Q5T686 147 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 BAIAP2L2Q6UXY1 529 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 C6orf201Q7Z4U5 140 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 RTN4RL2Q86UN3 420 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 GAPTQ8N292 157 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 SUMF2Q8NBJ7 301 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 FAM168AQ92567 244 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 CYYR1Q96J86 154 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 SNX22Q96L94 193 aa11.7□□□□□ -0.54
SEC61B-201ENST00000223641 NEDD4LQ96PU5 975 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms