RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TP53RKQ96S44 253 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 A0A1W2PPH5 198 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 OR6C6A6NF89 314 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 A6NLC8 198 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 UMAD1C9J7I0 102 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 CBR3O75828 277 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 KLF7O75840 302 aaPredicted RBP14.93□□□□□ -0.02
USB1-201ENST00000219281 CER1O95813 267 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 MT-ND4LP03901 98 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 GLAP06280 429 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 GLP1RP43220 463 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 HERV-K104P61576 105 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 PSG4Q00888 419 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 ZNF92Q03936 586 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 MALLQ13021 153 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 EXT1Q16394 746 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 LPAL2Q16609 132 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 EIF2S3LQ2VIR3 472 aaKnown RBP14.93□□□□□ -0.02
USB1-201ENST00000219281 RNF212Q495C1 297 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 TMEM182Q6ZP80 229 aaPredicted RBP14.93□□□□□ -0.02
USB1-201ENST00000219281 AGBL5Q8NDL9 886 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 SF3B5Q9BWJ5 86 aaKnown RBP14.93□□□□□ -0.02
USB1-201ENST00000219281 SH2D2AQ9NP31 389 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 SLC7A11Q9UPY5 501 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 FBXO7Q9Y3I1 522 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 HS3ST3B1Q9Y662 390 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 FREM2Q5SZK8 3169 aa14.93□□□□□ -0.02
USB1-201ENST00000219281 C5orf52A6NGY3 159 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 PRSS44E7EML9 344 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 PDCD6O75340 191 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 S100A6P06703 90 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 TCN2P20062 427 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 UCP3P55916 312 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 PLCXD3Q63HM9 321 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 RPS19BP1Q86WX3 136 aaKnown RBP14.92□□□□□ -0.02
USB1-201ENST00000219281 OR4D5Q8NGN0 318 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 FGFBP3Q8TAT2 258 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 RSRP1Q9BUV0 290 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 ZNF442Q9H7R0 627 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 STRAPQ9Y3F4 350 aaKnown RBP14.92□□□□□ -0.02
USB1-201ENST00000219281 A0A1W2PPE3 182 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 GJE1A6NN92 205 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 RAB5CP51148 216 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 FUT6P51993 359 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 RAC3P60763 192 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 GNMTQ14749 295 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 RBMS3Q6XE24 437 aaKnown RBP14.92□□□□□ -0.02
USB1-201ENST00000219281 AAED1Q7RTV5 226 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 ZNF561Q8N587 486 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 CCDC71LQ8N9Z2 235 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 FAM213BQ8TBF2 198 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 M1APQ8TC57 530 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 CD300LFQ8TDQ1 290 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 NTNG2Q96CW9 530 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 P4HTMQ9NXG6 502 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 TMED3Q9Y3Q3 217 aa14.92□□□□□ -0.02
USB1-201ENST00000219281 hCG_38984A0A1B0GV85 526 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 KLK3P07288 261 aaPredicted RBP14.91□□□□□ -0.02
USB1-201ENST00000219281 OR13C7P0DN81 318 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 PPP1CCP36873 323 aaKnown RBP14.91□□□□□ -0.02
USB1-201ENST00000219281 CARD18P57730 90 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 S100A12P80511 92 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 EWSR1Q01844 656 aaKnown RBP eCLIP14.91□□□□□ -0.02
USB1-201ENST00000219281 KDF1Q8NAX2 398 aaPredicted RBP14.91□□□□□ -0.02
USB1-201ENST00000219281 NANPQ8TBE9 248 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 CPT1CQ8TCG5 803 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 SLC39A7Q92504 469 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 WNT5BQ9H1J7 359 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 RFNGQ9Y644 331 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 A0A0G2JMM0 328 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 C3orf85A0A1B0GTC6 90 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 hCG_1809904A0A1W2PP81 198 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 A0A1W2PPB8 328 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 A0A1W2PR64 198 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 A0A1W2PRS3 328 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 A0A1W2PRV1 198 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 NKX2-6A6NCS4 301 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 FAM24AA6NFZ4 105 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 KIR3DP1A8MWS1 328 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 PPYP01298 95 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 ARG1P05089 322 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 HOXB1P14653 301 aaPredicted RBP14.91□□□□□ -0.02
USB1-201ENST00000219281 AGAP20933 346 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 LMO1P25800 156 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 DUSP3P51452 185 aaPredicted RBP14.91□□□□□ -0.02
USB1-201ENST00000219281 B3GALT5-AS1P59052 145 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 TRA2AQ13595 282 aaKnown RBP eCLIP14.91□□□□□ -0.02
USB1-201ENST00000219281 KRTAP27-1Q3LI81 207 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 IGSF11Q5DX21 431 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 TMEM105Q8N8V8 129 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 OR2H1Q9GZK4 316 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 SLC35B3Q9H1N7 401 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 TUBA4BQ9H853 241 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 KCNJ16Q9NPI9 418 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 IL36GQ9NZH8 169 aa14.91□□□□□ -0.02
USB1-201ENST00000219281 MPPED1O15442 326 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 OR7C1O76099 320 aaPredicted RBP14.9□□□□□ -0.02
USB1-201ENST00000219281 RBM11P57052 281 aaKnown RBP14.9□□□□□ -0.02
USB1-201ENST00000219281 CLINT1Q14677 625 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 CEACAM16Q2WEN9 425 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms