RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TMEM127O75204 238 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 MDKP21741 143 aaPredicted RBP13.08□□□□□ -0.32
EFNB1-201ENST00000204961 CXorf66Q5JRM2 361 aaPredicted RBP13.08□□□□□ -0.32
EFNB1-201ENST00000204961 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 SGCZQ96LD1 299 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 SCGB3A2Q96PL1 93 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 CHST5Q9GZS9 411 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 NGFP01138 241 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 CD63P08962 238 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 LIFP15018 202 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 RPS2P15880 293 aaKnown RBP13.08□□□□□ -0.32
EFNB1-201ENST00000204961 MSX1P28360 303 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 ZXDAP98168 799 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 OPN5Q6U736 354 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 TP53RKQ96S44 253 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 OCSTAMPQ9BR26 566 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 SLC7A11Q9UPY5 501 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 HDGFL3Q9Y3E1 203 aa13.08□□□□□ -0.32
EFNB1-201ENST00000204961 PINLYPA6NC86 204 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 FIGNL2A6NMB9 653 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 SCTP09683 121 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 UQCC3Q6UW78 93 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF611Q8N823 705 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 SLC30A7Q8NEW0 376 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 MMP26Q9NRE1 261 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 TFF1P04155 84 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 VAX1Q5SQQ9 334 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 OR56B2PQ8NGI1 322 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 OR1F12Q8NHA8 337 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 NABP1Q96AH0 204 aa13.07□□□□□ -0.32
EFNB1-201ENST00000204961 SMG1Q96Q15 3661 aaKnown RBP13.07□□□□□ -0.32
EFNB1-201ENST00000204961 LY6G6EA0A0G2JKS1 128 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 A0A1W2PNV4 684 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 FCGR3AP08637 254 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 CCL20P78556 96 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 AWAT1Q58HT5 328 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 SLC35G3Q8N808 338 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 FOXB1Q99853 325 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 U3KQA8 63 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 PCNX2A6NKB5 2137 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 TERTO14746 1132 aaKnown RBP13.06□□□□□ -0.32
EFNB1-201ENST00000204961 EIF1P41567 113 aaKnown RBP13.06□□□□□ -0.32
EFNB1-201ENST00000204961 SUMO3P55854 103 aaPredicted RBP13.06□□□□□ -0.32
EFNB1-201ENST00000204961 SAP25Q8TEE9 199 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 NTNG2Q96CW9 530 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
EFNB1-201ENST00000204961 WRBO00258 174 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 PET100P0DJ07 73 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 TGIF2Q9GZN2 237 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 DEPPQ9NTK1 212 aa13.06□□□□□ -0.32
EFNB1-201ENST00000204961 BCL3P20749 454 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 BMP5P22003 454 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 FOLR3P41439 243 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 GSK3AP49840 483 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 CXorf67Q86X51 503 aaPredicted RBP13.05□□□□□ -0.32
EFNB1-201ENST00000204961 TMEM123Q8N131 208 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 OSR2Q8N2R0 312 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 AGBL5Q8NDL9 886 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 HLA-CQ95604 372 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 PHYHIPLQ96FC7 376 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 MOB1AQ9H8S9 216 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 PROK2Q9HC23 129 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 SLC7A10Q9NS82 523 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 SPTAN1Q13813 2472 aaKnown RBP13.05□□□□□ -0.32
EFNB1-201ENST00000204961 PLCE1Q9P212 2302 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 K7ESF4 209 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 KLF7O75840 302 aaPredicted RBP13.05□□□□□ -0.32
EFNB1-201ENST00000204961 SCGNO76038 276 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 COX6A1P12074 109 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 PTAFRP25105 342 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 GLP1RP43220 463 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 MALLQ13021 153 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF695Q8IW36 515 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF565Q8N9K5 539 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 ADAMTS17Q8TE56 1095 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 NECAP2Q9NVZ3 263 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 IGHV1-45A0A0A0MS14 117 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 ARGFXA6NJG6 315 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 UMAD1C9J7I0 102 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 SOX15O60248 233 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 THBS4P35443 961 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 GUK1Q16774 197 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 ACER2Q5QJU3 275 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 CPEB3Q8NE35 698 aaKnown RBP13.05□□□□□ -0.32
EFNB1-201ENST00000204961 DNASE2BQ8WZ79 361 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 Q96M66 194 aa13.05□□□□□ -0.32
EFNB1-201ENST00000204961 PQLC2LA1A4F0 135 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 COLCA2A8K830 154 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 SERPINE3A8MV23 424 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 IGHV3-13P01766 116 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 IGHV3-7P01780 117 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 FAM53AQ6NSI3 398 aaPredicted RBP13.04□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF529Q6P280 563 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 LHFPL1Q86WI0 220 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 OR5T1Q8NG75 326 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 CCL28Q9NRJ3 127 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 FGF16O43320 207 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 LILRA1O75019 489 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 IAPPP10997 89 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms