RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 OSR2Q8N2R0 312 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 COMMD1Q8N668 190 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 BOD1Q96IK1 185 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 SUCNR1Q9BXA5 334 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 ZNF442Q9H7R0 627 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 CRLF2Q9HC73 371 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 RARRES3Q9UL19 164 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 LIPGQ9Y5X9 500 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 DMDP11532 3685 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 ZIC3O60481 467 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
USH1C-201ENST00000005226 NRASP01111 189 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
USH1C-201ENST00000005226 GNMTQ14749 295 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 SPSB3Q6PJ21 355 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 KMT5CQ86Y97 462 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 CARFQ8N187 725 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 OR4D5Q8NGN0 318 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
USH1C-201ENST00000005226 PBDC1Q9BVG4 233 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 OCIAD1Q9NX40 245 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 TINAGQ9UJW2 476 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 ZNF407Q9C0G0 2248 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 LOC102725191A0A1B0GVB3 256 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 IFITM10A6NMD0 228 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 H3BQ15 152 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 HSPB6O14558 160 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 TNFSF12O43508 249 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 CXCL1P09341 107 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 ZNF32P17041 273 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
USH1C-201ENST00000005226 HERV-K104P61576 105 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 RND3P61587 244 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 IL13RA2Q14627 380 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 C9orf152Q5JTZ5 239 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 CALHM1Q8IU99 346 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 NAT6Q93015 286 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 RAB39BQ96DA2 213 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 GLRX2Q9NS18 164 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 SLC7A11Q9UPY5 501 aa12.13□□□□□ -0.47
USH1C-201ENST00000005226 STRAPQ9Y3F4 350 aaKnown RBP12.13□□□□□ -0.47
USH1C-201ENST00000005226 C3orf85A0A1B0GTC6 90 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 BCAT2O15382 392 aaPredicted RBP12.12□□□□□ -0.47
USH1C-201ENST00000005226 TMEM50AO95807 157 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 CRYGSP22914 178 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 DTYMKP23919 212 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 ZNF92Q03936 586 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 RHEBQ15382 184 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 RAB30Q15771 203 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 HEPN1Q6WQI6 88 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 MAML2Q8IZL2 1156 aaPredicted RBP12.12□□□□□ -0.47
USH1C-201ENST00000005226 MOB3AQ96BX8 217 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 GGACTQ9BVM4 153 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 ZNF286AQ9HBT8 521 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 PARPBPQ9NWS1 579 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 UBE2J1Q9Y385 318 aaPredicted RBP12.12□□□□□ -0.47
USH1C-201ENST00000005226 ZNF587BE7ETH6 402 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 PROB1E7EW31 1015 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 MPPED1O15442 326 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 IGHV3-9P01782 118 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 IGHV2-70P01814 119 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 TAGLN2P37802 199 aaKnown RBP12.12□□□□□ -0.47
USH1C-201ENST00000005226 HTR5AP47898 357 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 AFF3P51826 1226 aaKnown RBP12.12□□□□□ -0.47
USH1C-201ENST00000005226 PDZD11Q5EBL8 140 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 LRTM2Q8N967 370 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 CADM4Q8NFZ8 388 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 OR1F12Q8NHA8 337 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 YPEL4Q96NS1 127 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 SYT3Q9BQG1 590 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 ANGPTL4Q9BY76 406 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 SLC7A10Q9NS82 523 aa12.12□□□□□ -0.47
USH1C-201ENST00000005226 FOXD3Q9UJU5 478 aaPredicted RBP12.12□□□□□ -0.47
USH1C-201ENST00000005226 ADAMTS20P59510 1910 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 SYNGR3O43761 229 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 NDUFS6O75380 124 aaKnown RBP12.11□□□□□ -0.47
USH1C-201ENST00000005226 PPYP01298 95 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 GNRHRP30968 328 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 FAM27BQ5VT28 67 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 PLCXD3Q63HM9 321 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 ZNF385CQ66K41 422 aaPredicted RBP12.11□□□□□ -0.47
USH1C-201ENST00000005226 YRDCQ86U90 279 aaKnown RBP12.11□□□□□ -0.47
USH1C-201ENST00000005226 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 OR5C1Q8NGR4 320 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 SPSB1Q96BD6 273 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 TGIF2-C20orf24A0A0A6YYL0 155 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 IGHV5-10-1A0A0J9YXX1 117 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 TP53I11O14683 189 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 TERTO14746 1132 aaKnown RBP12.11□□□□□ -0.47
USH1C-201ENST00000005226 ADAM20O43506 726 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 IFNA17P01571 189 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 S100PP25815 95 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
USH1C-201ENST00000005226 RGS19P49795 217 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms