RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Olfr1158A2BHP7 313 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 D7Ertd443eD2J0Y4 644 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Npffr1E9Q468 432 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Itln1O88310 313 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Zfp36l2P23949 484 aaKnown RBP16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Shc1P98083 579 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 VwceQ3U515 929 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Lyg2Q3V1I0 213 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Lcn4Q62472 185 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Svs6Q64356 99 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr1148Q7TR35 314 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Kiaa1456Q80WQ4 447 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr60Q8VGL4 311 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr559Q8VH14 318 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Pla1aQ8VI78 456 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 GgactQ923B0 149 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Sgo1Q9CXH7 517 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Exosc8Q9D753 276 aaKnown RBP16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Elp4Q9ER73 422 aa16.53■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm20878L7N244 103 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Sod1P08228 154 aaKnown RBP16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Bmi1P25916 324 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Supt4h1aP63271 117 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr453Q7TRV7 317 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Rspo4Q8BJ73 228 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Adhfe1Q8R0N6 465 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vmn1r230Q8R2A2 316 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Nt5mQ8VCE6 220 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Brinp1Q920P3 760 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Nrif2Q921B4 824 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Ucn3Q924A4 164 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr951Q9EQ94 314 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Syt9Q9R0N9 491 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Ca14Q9WVT6 337 aa16.52■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr936J3KMV2 267 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm3633L7N233 213 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm9611L7N476 213 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 AF067061O70616 171 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Polr1dP97304 133 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Tmeff1Q6PFE7 372 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Flrt1Q6RKD8 674 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Fam57bQ7TNV1 275 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Coro2aQ8C0P5 524 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Galnt6Q8C7U7 622 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Cd209cQ91ZW9 178 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Magt1Q9CQY5 335 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rtl8bQ9D1F0 113 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Tnfrsf19Q9JLL3 416 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Tex101Q9JMI7 250 aa16.52■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ighv5-15A0A0A6YWC7 117 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 CymB7ZWD6 379 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rab11fip2G3XA57 512 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Rab18P35293 206 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 NptnP97300 397 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Tmem104Q3TB48 496 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 BckdhbQ6P3A8 390 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ppp1r14dQ7TT52 146 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Znf574Q8BY46 900 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Hsd17b13Q8VCR2 304 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr502Q8VG09 314 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Prss22Q9ER10 306 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Slc30a7Q9JKN1 378 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Piezo2Q8CD54 2822 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Susd5G3UW60 619 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Npas1P97459 594 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Zfp772Q3UQL6 416 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Sec14l3Q5SQ27 401 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Kyat3Q71RI9 455 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Fbxw13Q8BI57 466 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr401Q8VFX6 315 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 1700025F22RikQ9D9Y7 111 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr943Q9EQ92 314 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Tmem196V9GX04 182 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Notch4P31695 1964 aa16.51■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ldlrad1D3YYZ1 218 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm42421F6X8D5 166 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm5225J3QPL3 108 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Oprm1P42866 398 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 SlbpP97440 275 aaKnown RBP16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ceacam14Q78Y72 263 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Plekha1Q8BUL6 383 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Fcrl1Q8R4Y0 343 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr642Q924X8 314 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ackr1Q9QUI6 334 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Actl6aQ9Z2N8 429 aaKnown RBP16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr432E9Q8M2 312 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ccdc74aE9Q9U8 364 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Esp34G3UXG0 151 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm21721J3QMK7 227 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 GamtO35969 236 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ier2P17950 221 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Adra2cQ01337 458 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gpr160Q3U3F9 336 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Gm7534Q3UU21 679 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Scarb1Q61009 509 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr1477Q7TQQ7 315 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Ankrd34cQ8BLB8 534 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr135Q8VEY4 312 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 BmfQ91ZE9 185 aa16.5■□□□□ 0.23
Shkbp1-201ENSMUST00000003857 Olfr702Q920Z2 318 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms