RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 C20orf85Q9H1P6 137 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 ZNF107Q9UII5 783 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-232ENST00000641947 NUBP2Q9Y5Y2 271 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 PKDREJQ9NTG1 2253 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 IGKV1D-8A0A087WSZ0 117 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-232ENST00000641947 SIAH2O43255 324 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 CA11O75493 328 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 RAB3DO95716 219 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 GMFBP60983 142 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 TLE1Q04724 770 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 ST3GAL2Q16842 350 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 NCMAPQ5T1S8 102 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 BTN2A1Q7KYR7 527 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 TAAR3PQ9P1P4 343 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 RCC2Q9P258 522 aaKnown RBP14.89□□□□□ -0.03
PHGDH-232ENST00000641947 ALG5Q9Y673 324 aa14.89□□□□□ -0.03
PHGDH-232ENST00000641947 UBE2QL1A1L167 161 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A10PA6NDY2 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A18PA6NE21 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A16PA6NEW6 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A20PA6NIJ5 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A8PA6NJQ4 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A7PA6NKC0 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A22PA8MWA6 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A12PA8MX19 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A5PA8MXJ8 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A23PA8MXZ1 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 SHISA9B4DS77 424 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A15PP0C7V4 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A13PP0C7W8 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A14PP0C7W9 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM90A24PP0C7X0 464 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 HRH1P35367 487 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 ADIPOQQ15848 244 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 MICBQ29980 383 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 AGAP6Q5VW22 663 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 ZNF782Q6ZMW2 699 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-232ENST00000641947 NEUROG1Q92886 237 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 PLPPR2Q96GM1 343 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 BBC3Q96PG8 261 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-232ENST00000641947 SLC6A7Q99884 636 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 UFSP2Q9NUQ7 469 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 NKIRAS2Q9NYR9 191 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 COPZ2Q9P299 210 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 POLDIP2Q9Y2S7 368 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 ATP23Q9Y6H3 246 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 DCHS2Q6V1P9 2916 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 A0A1B0GUH1 482 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAM221AA4D161 298 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 WNT9BO14905 357 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 CSN2P05814 226 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FUT3P21217 361 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 FAUP35544 74 aaKnown RBP14.88□□□□□ -0.03
PHGDH-232ENST00000641947 NKPD1Q17RQ9 610 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 ATAD3CQ5T2N8 411 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 WDR82Q6UXN9 313 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 HOGA1Q86XE5 327 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 GALNT11Q8NCW6 608 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 ELMOD3Q96FG2 381 aa14.88□□□□□ -0.03
PHGDH-232ENST00000641947 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-232ENST00000641947 NDUFB6O95139 128 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 PMP2P02689 132 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 AMY2AP04746 511 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 H2AFB2P0C5Z0 115 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 CD200P41217 278 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 BTG1P62324 171 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 IKZF1Q13422 519 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 ARL6IP1Q15041 203 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 MPV17LQ2QL34 196 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 SPERTQ8NA61 448 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 POC1AQ8NBT0 407 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 MRGPRFQ96AM1 343 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 POM121Q96HA1 1249 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 ST6GALNAC5Q9BVH7 336 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 WDR13Q9H1Z4 485 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 ZNF442Q9H7R0 627 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 HES4Q9HCC6 221 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 KCNJ16Q9NPI9 418 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 ARFGEF3Q5TH69 2177 aa14.87□□□□□ -0.03
PHGDH-232ENST00000641947 FLNCQ14315 2725 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 TRAV24A0A0B4J272 114 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 ARPC1BO15143 372 aaKnown RBP14.86□□□□□ -0.03
PHGDH-232ENST00000641947 SPRY3O43610 288 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 PTBP3O95758 552 aaKnown RBP14.86□□□□□ -0.03
PHGDH-232ENST00000641947 SORDQ00796 357 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 IL13RA2Q14627 380 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 C4orf17Q53FE4 359 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 Q6P435 159 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 BPIFB2Q8N4F0 458 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 OR4K15Q8NH41 348 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 BEX2Q9BXY8 128 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 BEX1Q9HBH7 125 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 NPDC1Q9NQX5 325 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-232ENST00000641947 ZNF701Q9NV72 531 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-232ENST00000641947 DYSFO75923 2080 aa14.86□□□□□ -0.03
PHGDH-232ENST00000641947 PLSCR5A0PG75 271 aa14.85□□□□□ -0.03
PHGDH-232ENST00000641947 A6NLC8 198 aa14.85□□□□□ -0.03
PHGDH-232ENST00000641947 HSPB6O14558 160 aa14.85□□□□□ -0.03
PHGDH-232ENST00000641947 ZG16O60844 167 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms