RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CACNA1GO43497 2377 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 C7orf66A4D0T2 115 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 GALR2O43603 387 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-223ENST00000640640 IGF2P01344 180 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 DEFA4P12838 97 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 TSPO2Q5TGU0 170 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 PRSS54Q6PEW0 395 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 FBXO17Q96EF6 278 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 TAAR6Q96RI8 345 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 FN3KRPQ9HA64 309 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 MTCL1Q9Y4B5 1905 aaKnown RBP15.44■□□□□ 0.06
SCARB2-223ENST00000640640 IGHV1-45A0A0A0MS14 117 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 TRBV5-5A0A0J9YX44 114 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 ZNF705FA8MVS1 300 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-223ENST00000640640 F6UZH7 168 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 ZNF705DP0CH99 300 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-223ENST00000640640 ZNF705BP0CI00 300 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-223ENST00000640640 GABRA1P14867 456 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 SLC35E1Q96K37 410 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 NEUROG3Q9Y4Z2 214 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 C3orf85A0A1B0GTC6 90 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 HEXAP06865 529 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 MICBQ29980 383 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 CLEC18BQ6UXF7 455 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 SPSB2Q99619 263 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 GLRX2Q9NS18 164 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 ZNF355PQ9NSJ1 428 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 CYB5R1Q9UHQ9 305 aa15.44■□□□□ 0.06
SCARB2-223ENST00000640640 SCAF4O95104 1147 aaKnown RBP15.43■□□□□ 0.06
SCARB2-223ENST00000640640 PDGFBP01127 241 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-223ENST00000640640 CTSDP07339 412 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-223ENST00000640640 MPGP29372 298 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 DMWDQ09019 674 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 OR10V1Q8NGI7 309 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 RHOFQ9HBH0 211 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 KLF4O43474 513 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 LINC01590Q5TEZ4 76 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 PTX4Q96A99 478 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 MAP6Q96JE9 813 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 ADGRG7Q96K78 797 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 MRPL22Q9NWU5 206 aaKnown RBP15.43■□□□□ 0.06
SCARB2-223ENST00000640640 C17orf51A8MQB3 221 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 ONECUT2O95948 504 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 CT45A6P0DMU7 189 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 CT45A5P0DMU8 189 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 CT45A7P0DMV0 189 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 CT45A1Q5HYN5 189 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 CT45A3Q8NHU0 189 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 APOBEC4Q8WW27 367 aaKnown RBP15.43■□□□□ 0.06
SCARB2-223ENST00000640640 SLC39A7Q92504 469 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 BTF3L4Q96K17 158 aa15.43■□□□□ 0.06
SCARB2-223ENST00000640640 ZNF727A8MUV8 499 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 MS4A18H0YCH9 400 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 MASP2O00187 686 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 ADAM20O43506 726 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 IGLV3-19P01714 112 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 COX5AP20674 150 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 ARL3P36405 182 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 MS4A18Q3C1V0 323 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 ZNF787Q6DD87 383 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 RXFP4Q8TDU9 374 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 SAMD10Q9BYL1 202 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 MED12Q93074 2177 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 HEATR5BQ9P2D3 2071 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 M0R1X1 148 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 SP1P08047 785 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 COL19A1Q14993 1142 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 FSTP19883 344 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 GABRA4P48169 554 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 TMEM88Q6PEY1 159 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 SLC25A42Q86VD7 318 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 ACTR3CQ9C0K3 210 aaPredicted RBP15.42■□□□□ 0.06
SCARB2-223ENST00000640640 ESRP2Q9H6T0 727 aaKnown RBP15.42■□□□□ 0.06
SCARB2-223ENST00000640640 PIN1P1O15428 100 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 EGR4Q05215 589 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 IL34Q6ZMJ4 242 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 C9orf62Q8N4C0 152 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 CORO2AQ92828 525 aa15.42■□□□□ 0.06
SCARB2-223ENST00000640640 PINX1Q96BK5 328 aaKnown RBP15.42■□□□□ 0.06
SCARB2-223ENST00000640640 TIAF1O95411 115 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 CRHP06850 196 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 MDH2P40926 338 aaKnown RBP15.41■□□□□ 0.06
SCARB2-223ENST00000640640 ASCL1P50553 236 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 RPS4XP62701 263 aaKnown RBP15.41■□□□□ 0.06
SCARB2-223ENST00000640640 H7BYZ3 331 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 PGA4P0DJD7 388 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 RPS16P62249 146 aaKnown RBP15.41■□□□□ 0.06
SCARB2-223ENST00000640640 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 PRR13Q9NZ81 148 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 MBP02144 154 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 LRRC29Q8WV35 223 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 CACNA1DQ01668 2161 aa15.41■□□□□ 0.06
SCARB2-223ENST00000640640 ZNF705GA8MUZ8 300 aaPredicted RBP15.4■□□□□ 0.06
SCARB2-223ENST00000640640 TGFBR3LH3BV60 316 aa15.4■□□□□ 0.06
SCARB2-223ENST00000640640 TRIM77I1YAP6 450 aa15.4■□□□□ 0.06
SCARB2-223ENST00000640640 OR2C1O95371 312 aa15.4■□□□□ 0.06
SCARB2-223ENST00000640640 OR3A1P47881 315 aa15.4■□□□□ 0.06
SCARB2-223ENST00000640640 PMP22Q01453 160 aa15.4■□□□□ 0.06
SCARB2-223ENST00000640640 HIKESHIQ53FT3 197 aa15.4■□□□□ 0.06
SCARB2-223ENST00000640640 FAM181AQ8N9Y4 354 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms