RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 HIKESHIQ53FT3 197 aa12.63□□□□□ -0.39
SCARB2-208ENST00000638372 SEZ6L2Q6UXD5 910 aa12.63□□□□□ -0.39
SCARB2-208ENST00000638372 OR5M8Q8NGP6 311 aa12.63□□□□□ -0.39
SCARB2-208ENST00000638372 TCEAL7Q9BRU2 100 aa12.63□□□□□ -0.39
SCARB2-208ENST00000638372 TPPP3Q9BW30 176 aa12.63□□□□□ -0.39
SCARB2-208ENST00000638372 TRAV39A0A0B4J263 110 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 F6UZH7 168 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 TRIM77I1YAP6 450 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 CDIPTO14735 213 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 C9orf152Q5JTZ5 239 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 MAP6Q96JE9 813 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 ZNF75AQ96N20 296 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 ADAM19Q9H013 955 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 C21orf140B9A014 251 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 OR7C2O60412 319 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 OR3A1P47881 315 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 ZNF485Q8NCK3 441 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 ADIPOR1Q96A54 375 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 TVP23CQ96ET8 276 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 TINAGQ9UJW2 476 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 A0A1W2PP11 408 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 A0A1W2PR77 199 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 NPBWR1P48145 328 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 CLEC18BQ6UXF7 455 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 NECAP1Q8NC96 275 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 OR2M7Q8NG81 312 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 MRGPRDQ8TDS7 321 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 LRRC29Q8WV35 223 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 AP1S3Q96PC3 154 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 OR2H1Q9GZK4 316 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 NXF2Q9GZY0 626 aaKnown RBP12.62□□□□□ -0.39
SCARB2-208ENST00000638372 NAA60Q9H7X0 242 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 TMEM38BQ9NVV0 291 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 NTMQ9P121 344 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 ABCA1O95477 2261 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 FAM24AA6NFZ4 105 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 RAB5CP51148 216 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 SUB1P53999 127 aaKnown RBP eCLIP12.62□□□□□ -0.393e-7■■■□□ 19
SCARB2-208ENST00000638372 GGTLC2Q14390 218 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 CLEC9AQ6UXN8 241 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 UBAC2Q8NBM4 344 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 CMTM2Q8TAZ6 248 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 CIB3Q96Q77 187 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-208ENST00000638372 AICDAQ9GZX7 198 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 LAMP3Q9UQV4 416 aa12.62□□□□□ -0.39
SCARB2-208ENST00000638372 C3orf85A0A1B0GTC6 90 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 OR5B21A6NL26 309 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 CST2P09228 141 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 KIF26BQ2KJY2 2108 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 PDZD11Q5EBL8 140 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 OR4D10Q8NGI6 311 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 SAP25Q8TEE9 199 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 DNASE2BQ8WZ79 361 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 AKR1E2Q96JD6 320 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 PGLYRP3Q96LB9 341 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 PPP1R14DQ9NXH3 145 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 OPN4Q9UHM6 478 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 ATPIF1Q9UII2 106 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 HS3ST3B1Q9Y662 390 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 SOX15O60248 233 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 TNFRSF1AP19438 455 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 COX5AP20674 150 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 HNF1AP20823 631 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 THBS3P49746 956 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 PIGYQ3MUY2 71 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 OR5C1Q8NGR4 320 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 PIK3IP1Q96FE7 263 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 RAB33BQ9H082 229 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 GPR27Q9NS67 375 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 CHD5Q8TDI0 1954 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 NUDT19A8MXV4 375 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 TIAF1O95411 115 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 TBX6O95947 436 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-208ENST00000638372 CST4P01036 141 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 DTYMKP23919 212 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 GNG10P50151 68 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 STARD6P59095 220 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 C15orf54Q8N8G6 183 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 CCL17Q92583 94 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 DYRK2Q92630 601 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 HIF1ANQ9NWT6 349 aa12.61□□□□□ -0.39
SCARB2-208ENST00000638372 PPP1R2P9O14990 202 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 FCGR3BO75015 233 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 MPPED2Q15777 294 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 Q3ZCU0 254 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 LYG1Q8N1E2 194 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 SMIM7Q9BQ49 75 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 ACTR3CQ9C0K3 210 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-208ENST00000638372 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 HLA-DQB1P01920 261 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 MIDNQ504T8 468 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 MPC1Q9Y5U8 109 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 CPN1P15169 458 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 POLR2GP62487 172 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCARB2-208ENST00000638372 MITD1Q8WV92 249 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 HDHD3Q9BSH5 251 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-208ENST00000638372 FBXL17Q9UF56 701 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 IGKV1D-42A0A075B6H8 117 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 393.2 ms