RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 NAAAQ02083 359 aa14□□□□□ -0.17
CLN5-218ENST00000637397 GUSBP11Q6P575 273 aa14□□□□□ -0.17
CLN5-218ENST00000637397 APOBEC3DQ96AK3 386 aaPredicted RBP14□□□□□ -0.17
CLN5-218ENST00000637397 PINX1Q96BK5 328 aaKnown RBP14□□□□□ -0.17
CLN5-218ENST00000637397 BRCA1P38398 1863 aaKnown RBP14□□□□□ -0.17
CLN5-218ENST00000637397 GREB1Q4ZG55 1949 aa14□□□□□ -0.17
CLN5-218ENST00000637397 AQP7O14520 342 aa14□□□□□ -0.17
CLN5-218ENST00000637397 SLC25A6P12236 298 aa14□□□□□ -0.17
CLN5-218ENST00000637397 PNLIPP16233 465 aa14□□□□□ -0.17
CLN5-218ENST00000637397 HDHD3Q9BSH5 251 aaPredicted RBP14□□□□□ -0.17
CLN5-218ENST00000637397 PARP11Q9NR21 331 aa14□□□□□ -0.17
CLN5-218ENST00000637397 YBX2Q9Y2T7 364 aaKnown RBP14□□□□□ -0.17
CLN5-218ENST00000637397 IL11P20809 199 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 CALCRP30988 508 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 ZNF260Q3ZCT1 412 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 PABPC1L2AQ5JQF8 200 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 BTNL8Q6UX41 500 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 DBX2Q6ZNG2 339 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 TECTBQ96PL2 329 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 CACNG5Q9UF02 275 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 SPINK2P20155 84 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 GPR12P47775 334 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 THBS3P49746 956 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 HLA-DRB3P79483 266 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 FHL5Q5TD97 284 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 C6orf15Q6UXA7 325 aaPredicted RBP13.99□□□□□ -0.17
CLN5-218ENST00000637397 RBMXL3Q8N7X1 1067 aaKnown RBP13.99□□□□□ -0.17
CLN5-218ENST00000637397 UCK1Q9HA47 277 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 ANK1P16157 1881 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 MAP1LC3B2A6NCE7 125 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 DXOO77932 396 aaKnown RBP13.99□□□□□ -0.17
CLN5-218ENST00000637397 FGF2P09038 288 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 CIB3Q96Q77 187 aaPredicted RBP13.99□□□□□ -0.17
CLN5-218ENST00000637397 MENTQ9BUN1 341 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 MAP1LC3BQ9GZQ8 125 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 PLXNA1Q9UIW2 1896 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 FSTP19883 344 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 NTF3P20783 257 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 P2RY1P47900 373 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 FER1L6-AS2Q96M78 137 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 RAB40CQ96S21 281 aa13.99□□□□□ -0.17
CLN5-218ENST00000637397 CCL2P13500 99 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 DYNLT3P51808 116 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 PLPPR2Q96GM1 343 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 ZDHHC11Q9H8X9 412 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 BRWD3Q6RI45 1802 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 IGHV1OR15-9A0A0B4J2B8 117 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 MEX3AA1L020 520 aaKnown RBP13.98□□□□□ -0.17
CLN5-218ENST00000637397 YKT6O15498 198 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 CTSBP07858 339 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 ROM1Q03395 351 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 FAM103A1Q9BTL3 118 aaKnown RBP13.98□□□□□ -0.17
CLN5-218ENST00000637397 IL9P15248 144 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 RHBDD2Q6NTF9 364 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 ZNF391Q9UJN7 358 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 OR2M5A3KFT3 312 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 AQP7P3A6NL99 342 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 SMIM10L1P0DMW3 83 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 CEBPEQ15744 281 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 PHYHD1Q5SRE7 291 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 TBC1D26Q86UD7 250 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 HOGA1Q86XE5 327 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 ZNF721Q8TF20 911 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 CTHRC1Q96CG8 243 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 SMIM10Q96HG1 83 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 RASL10BQ96S79 203 aa13.98□□□□□ -0.17
CLN5-218ENST00000637397 BTCP35070 178 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 LSM6P62312 80 aaKnown RBP13.97□□□□□ -0.17
CLN5-218ENST00000637397 PRDX4Q13162 271 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 OR8B8Q15620 311 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 LDLRAD3Q86YD5 345 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 FAM58AQ8N1B3 248 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 ZNRF4Q8WWF5 429 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 SOSTQ9BQB4 213 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 AICDAQ9GZX7 198 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 ZNF331Q9NQX6 463 aaPredicted RBP13.97□□□□□ -0.17
CLN5-218ENST00000637397 RTTNQ86VV8 2226 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 IGKV1D-42A0A075B6H8 117 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 CHST1O43916 411 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 GNG3P63215 75 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 TMEM241Q24JQ0 296 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 TMEM178AQ8NBL3 297 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 DYRK2Q92630 601 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 GALMQ96C23 342 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 USB1Q9BQ65 265 aaKnown RBP13.97□□□□□ -0.17
CLN5-218ENST00000637397 LPAR5Q9H1C0 372 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 SH3BGRL2Q9UJC5 107 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 LOC105371267A0A1B0GV96 52 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 SOX15O60248 233 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 ZXDAP98168 799 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 CHD5Q8TDI0 1954 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 ENSAO43768 121 aaKnown RBP13.97□□□□□ -0.17
CLN5-218ENST00000637397 MFRPQ9BY79 579 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 GPR132Q9UNW8 380 aa13.97□□□□□ -0.17
CLN5-218ENST00000637397 OTOFQ9HC10 1997 aa13.96□□□□□ -0.17
CLN5-218ENST00000637397 SEC14L6B5MCN3 397 aa13.96□□□□□ -0.17
CLN5-218ENST00000637397 DVL1O14640 695 aa13.96□□□□□ -0.17
CLN5-218ENST00000637397 PPYP01298 95 aa13.96□□□□□ -0.17
CLN5-218ENST00000637397 FABP6P51161 128 aa13.96□□□□□ -0.17
CLN5-218ENST00000637397 RAC1P63000 192 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms