RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 DCKP27707 260 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 PEX2P28328 305 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 DUSP1P28562 367 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 NPBWR2P48146 333 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 SNU13P55769 128 aaKnown RBP11.28□□□□□ -0.6
PNKP-228ENST00000637325 LGALS4P56470 323 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 RPL15P61313 204 aaKnown RBP11.28□□□□□ -0.6
PNKP-228ENST00000637325 EDDM3AQ14507 147 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 ZNF273Q14593 569 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 TMPRSS11AQ6ZMR5 421 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 GDPGP1Q6ZNW5 385 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 SERPINA12Q8IW75 414 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 OR8H2Q8N162 312 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 DHRSXQ8N5I4 330 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 OR5D14Q8NGL3 314 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 PPP1R35Q8TAP8 253 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 CNIH3Q8TBE1 160 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 SPACA5Q96QH8 159 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 PDCD1LG2Q9BQ51 273 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 ZNF649Q9BS31 505 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 C1RLQ9NZP8 487 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 ZNRD1Q9P1U0 126 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 PCDHGB5Q9Y5G0 923 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 ZNF737O75373 536 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 NDUFA7O95182 113 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 MT-ND2P03891 347 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 LIMS3P0CW19 117 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 LIMS4P0CW20 117 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 MYL12AP19105 171 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 GTF2A1P52655 376 aaPredicted RBP11.27□□□□□ -0.61
PNKP-228ENST00000637325 MED21Q13503 144 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 GRK1Q15835 563 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 MIDNQ504T8 468 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 HCP5Q6MZN7 132 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 OR5D18Q8NGL1 313 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 OR5R1Q8NH85 324 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 CHCHD3Q9NX63 227 aaKnown RBP11.27□□□□□ -0.61
PNKP-228ENST00000637325 IL36RNQ9UBH0 155 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 GSTK1Q9Y2Q3 226 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 MMP24Q9Y5R2 645 aa11.27□□□□□ -0.61
PNKP-228ENST00000637325 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 TMEM82A0PJX8 343 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 SH2D1BO14796 132 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 MAGEB3O15480 346 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 SULT1B1O43704 296 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 TMEM225BP0DP42 221 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 ETV1P50549 477 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 MEF2CQ06413 473 aaPredicted RBP11.26□□□□□ -0.61
PNKP-228ENST00000637325 ZNF146Q15072 292 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 SPIN3Q5JUX0 258 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 OLFML2AQ68BL7 652 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
PNKP-228ENST00000637325 RPL22L1Q6P5R6 122 aaKnown RBP11.26□□□□□ -0.61
PNKP-228ENST00000637325 ZNF782Q6ZMW2 699 aaPredicted RBP11.26□□□□□ -0.61
PNKP-228ENST00000637325 C17orf107Q6ZR85 190 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 SATL1Q86VE3 508 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 PARP16Q8N5Y8 322 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 BEND2Q8NDZ0 799 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 JAM3Q9BX67 310 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 CHST6Q9GZX3 395 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 SLITRK2Q9H156 845 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 SEBOXQ9HB31 216 aaPredicted RBP11.26□□□□□ -0.61
PNKP-228ENST00000637325 HMG20AQ9NP66 347 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 EXOSC4Q9NPD3 245 aaKnown RBP11.26□□□□□ -0.61
PNKP-228ENST00000637325 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
PNKP-228ENST00000637325 EXOSC1Q9Y3B2 195 aaKnown RBP11.26□□□□□ -0.61
PNKP-228ENST00000637325 MEX3AA1L020 520 aaKnown RBP11.25□□□□□ -0.61
PNKP-228ENST00000637325 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 C17orf98A8MV24 154 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 SIRPB1O00241 398 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 MGST3O14880 152 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 KDM4BO94953 1096 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 ALX3O95076 343 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 CD2P06729 351 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 ZNF728P0DKX0 622 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 RAB3AP20336 220 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 SOX2P48431 317 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 ADARB1P78563 741 aaKnown RBP11.25□□□□□ -0.61
PNKP-228ENST00000637325 RELBQ01201 579 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 SCN1BQ07699 218 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 IL18R1Q13478 541 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 TAF9Q16594 264 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 CCDC58Q4VC31 144 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 OR2G6Q5TZ20 316 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 SAXO1Q8IYX7 474 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 C11orf42Q8N5U0 333 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 OR13D1Q8NGV5 346 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 GPR148Q8TDV2 347 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 C17orf50Q8WW18 174 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 CPNE2Q96FN4 548 aaPredicted RBP11.25□□□□□ -0.61
PNKP-228ENST00000637325 TMEM80Q96HE8 168 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 ZNF714Q96N38 554 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 GPER1Q99527 375 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 SSX3Q99909 188 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 RHOFQ9HBH0 211 aa11.25□□□□□ -0.61
PNKP-228ENST00000637325 WNK1Q9H4A3 2382 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 IGKV1-12A0A0C4DH73 117 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 ANKRD65E5RJM6 399 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 H3BUX3 64 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms