RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 CTSSP25774 331 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 ATP6V0CP27449 155 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 SNRPD1P62314 119 aaKnown RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 MFGE8Q08431 387 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 FOXF1Q12946 379 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 IL15RAQ13261 267 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 SPSB3Q6PJ21 355 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 PRSS57Q6UWY2 283 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM25Q86YD3 366 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF595Q8IYB9 648 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 SLC38A9Q8NBW4 561 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 OR10W1Q8NGF6 305 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 OR10G4Q8NGN3 311 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM230Q96A57 120 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 LPAR5Q9H1C0 372 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 RYDENQ9NUL5 291 aaKnown RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 DOCK9Q9BZ29 2069 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 CTSDP07339 412 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 NPPBP16860 134 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF43P17038 809 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 ARR3P36575 388 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 RBPJQ06330 500 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 BSXQ3C1V8 233 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 KRTCAP3Q53RY4 240 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 FAM78AQ5JUQ0 283 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 CLDND2Q8NHS1 167 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 SLAMF6Q96DU3 332 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 KLHDC3Q9BQ90 382 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 PYGO2Q9BRQ0 406 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 MTHFD2LQ9H903 347 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 PLSCR4Q9NRQ2 329 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 MRM2Q9UI43 246 aaKnown RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 CDC42EP3Q9UKI2 254 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 B3GALT5Q9Y2C3 310 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 GLOD5A6NK44 160 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 DIRC3C9JPN6 131 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 CD55P08174 381 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 ERGP11308 486 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 AMY2BP19961 511 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 TCN2P20062 427 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 ALOX5APP20292 161 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 SSR2P43308 183 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 CLDN2P57739 230 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM240Q5SV17 173 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM64Q6YI46 380 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 D2HGDHQ8N465 521 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 NUP43Q8NFH3 380 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 OR51G1Q8NGK1 321 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 OR6N2Q8NGY6 317 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF480Q8WV37 535 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 LIPHQ8WWY8 451 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 IRF7Q92985 503 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 GPR146Q96CH1 333 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 SLC46A1Q96NT5 459 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 OR6C1Q96RD1 312 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 LPAR4Q99677 370 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 PRSS27Q9BQR3 290 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 NAT8Q9UHE5 227 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 PRSS50Q9UI38 385 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 LOC102723971A0A1B0GUV8 181 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 OR5B21A6NL26 309 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 UPK3AO75631 287 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 IFNA1P01562 189 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 H2BFMP0C1H6 154 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 CISD3P0C7P0 127 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 CD99P14209 185 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 SFTPDP35247 375 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 PRRX1P54821 245 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 SELENOVP59797 346 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 NSDHLQ15738 373 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF260Q3ZCT1 412 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 C9orf50Q5SZB4 431 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 ERASQ7Z444 233 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 LSRQ86X29 649 aaPredicted RBP6□□□□□ -1.45
SCN1A-213ENST00000636759 SIGLECL1Q8N7X8 197 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 EMG1Q92979 244 aaKnown RBP6□□□□□ -1.45
SCN1A-213ENST00000636759 GNPNAT1Q96EK6 184 aaPredicted RBP6□□□□□ -1.45
SCN1A-213ENST00000636759 SLC25A44Q96H78 314 aaPredicted RBP6□□□□□ -1.45
SCN1A-213ENST00000636759 DCBLD2Q96PD2 775 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 ADOQ96SZ5 270 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 MANBALQ9NQG1 85 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 GPR84Q9NQS5 396 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 B4GALT6Q9UBX8 382 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 SERTAD3Q9UJW9 196 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 LRP4O75096 1905 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 GAGE12BA1L429 117 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 CEBPZOSA8MTT3 80 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 BNIP3LO60238 219 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 CTSBP07858 339 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 HNRNPA1P09651 372 aaKnown RBP eCLIP6□□□□□ -1.45
SCN1A-213ENST00000636759 ASCL1P50553 236 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 ARFRP1Q13795 201 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 MLC1Q15049 377 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 FAM90A2PQ658T7 463 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 Q6ZWC4 215 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 DPY19L4Q7Z388 723 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 COMMD2Q86X83 199 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 BAGE3Q86Y29 109 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 BAGE2Q86Y30 109 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 OR4D6Q8NGJ1 314 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms