RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 ACAA1P09110 424 aaPredicted RBP12.61□□□□□ -0.39
CLN6-215ENST00000636674 CCL3P10147 92 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 CAMLGP49069 296 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 RHEBQ15382 184 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 EXT1Q16394 746 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 SP6Q3SY56 376 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 ETV3LQ6ZN32 361 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 OSR2Q8N2R0 312 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 ZNF561Q8N587 486 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 OR4D5Q8NGN0 318 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 OR2AE1Q8NHA4 323 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 OR1F12Q8NHA8 337 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 IMMP1LQ96LU5 166 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 ZNF700Q9H0M5 742 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 SMDT1Q9H4I9 107 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 RGCCQ9H4X1 137 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 C11orf1Q9H5F2 150 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 ZNF581Q9P0T4 197 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 DKKL1Q9UK85 242 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 FBXO9Q9UK97 447 aaPredicted RBP12.61□□□□□ -0.39
CLN6-215ENST00000636674 NSG1A0A0A6YYJ2 146 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 A0A0J9YW62 118 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 FAM230AA0A1W2PPH8 454 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 C7orf77A4D0Y5 90 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 GJE1A6NN92 205 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
CLN6-215ENST00000636674 NME2P1O60361 137 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 FGF5P12034 268 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 ZNF616Q08AN1 781 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 CHAF1BQ13112 559 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 TSC22D1Q15714 1073 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 SLC22A25Q6T423 547 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 FBXW12Q6X9E4 464 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 SNIP1Q8TAD8 396 aaKnown RBP12.61□□□□□ -0.39
CLN6-215ENST00000636674 CLDN23Q96B33 292 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 ZNF837Q96EG3 531 aaPredicted RBP12.61□□□□□ -0.39
CLN6-215ENST00000636674 TECTBQ96PL2 329 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 TMEM38BQ9NVV0 291 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 IGKV1-12A0A0C4DH73 117 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 K7N7A8 449 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 PDCD6O75340 191 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 DIRAS3O95661 229 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 IGKV1D-12P01611 117 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 ZNF44P15621 663 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 GLP1RP43220 463 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 SRPXP78539 464 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 PRSS33Q8NF86 280 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 OR8G5Q8NG78 346 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 OR52M1Q8NGK5 317 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 M1APQ8TC57 530 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 GNRHR2Q96P88 292 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 SRXN1Q9BYN0 137 aa12.6□□□□□ -0.39
CLN6-215ENST00000636674 AKIRIN1Q9H9L7 192 aaPredicted RBP12.6□□□□□ -0.39
CLN6-215ENST00000636674 hCG_38984A0A1B0GV85 526 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 GEMIN2O14893 280 aaKnown RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 XRCC2O43543 280 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 CDS2O95674 445 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 NRASP01111 189 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 CELA2AP08217 269 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 COX6A1P12074 109 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 MAS1LP35410 378 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 FUT6P51993 359 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 FXYD4P59646 89 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 SNRPEP62304 92 aaKnown RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 RSPO4Q2I0M5 234 aaPredicted RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 TMEM211Q6ICI0 200 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 FAM185AQ8N0U4 392 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 OR1J1Q8NGS3 322 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 CPT1CQ8TCG5 803 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 BOD1Q96IK1 185 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 SPACA1Q9HBV2 294 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 METTL1Q9UBP6 276 aaKnown RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 RCL1Q9Y2P8 373 aaKnown RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 PTRH2Q9Y3E5 179 aaKnown RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 TNFSF11O14788 317 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 SSR4P51571 173 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 RAC3P60763 192 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 EIF2S3LQ2VIR3 472 aaKnown RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 PIGYQ3MUY2 71 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 PHLDA2Q53GA4 152 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 TSPO2Q5TGU0 170 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 ZNF774Q6NX45 483 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 Q6ZS49 121 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 FBXL14Q8N1E6 418 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 OR5L1Q8NGL2 311 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 LILRB1Q8NHL6 650 aaPredicted RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 ABHD14BQ96IU4 210 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 PARP12Q9H0J9 701 aaKnown RBP12.59□□□□□ -0.39
CLN6-215ENST00000636674 SLC35B3Q9H1N7 401 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
CLN6-215ENST00000636674 RTTNQ86VV8 2226 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 UMAD1C9J7I0 102 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 CBR3O75828 277 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 LCATP04180 440 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 UMODP07911 640 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 SNRNP70P08621 437 aaKnown RBP12.58□□□□□ -0.4
CLN6-215ENST00000636674 RBM11P57052 281 aaKnown RBP12.58□□□□□ -0.4
CLN6-215ENST00000636674 RAB1AP62820 205 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms