RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 OR13C3Q8NGS6 347 aa14.55□□□□□ -0.08
PNKP-225ENST00000636214 RPS4Y2Q8TD47 263 aa14.55□□□□□ -0.08
PNKP-225ENST00000636214 SPSB1Q96BD6 273 aa14.55□□□□□ -0.08
PNKP-225ENST00000636214 FGGYQ96C11 551 aa14.55□□□□□ -0.08
PNKP-225ENST00000636214 ADAT3Q96EY9 351 aaPredicted RBP14.55□□□□□ -0.08
PNKP-225ENST00000636214 OPALINQ96PE5 141 aa14.55□□□□□ -0.08
PNKP-225ENST00000636214 RBFOX1Q9NWB1 397 aaKnown RBP14.55□□□□□ -0.08
PNKP-225ENST00000636214 PITPNC1Q9UKF7 332 aa14.55□□□□□ -0.08
PNKP-225ENST00000636214 GMPPBQ9Y5P6 360 aa14.55□□□□□ -0.08
PNKP-225ENST00000636214 MEX3AA1L020 520 aaKnown RBP14.54□□□□□ -0.08
PNKP-225ENST00000636214 F8VVB4 439 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 F8VWA3 439 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 H3BUI4 141 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 IGHV1-8P0DP01 117 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 PAX6P26367 422 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 KIR2DS4P43632 304 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 OR12D2P58182 307 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 ZNF91Q05481 1191 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 PDLIM3Q53GG5 364 aaPredicted RBP14.54□□□□□ -0.08
PNKP-225ENST00000636214 ARSJQ5FYB0 599 aaPredicted RBP14.54□□□□□ -0.08
PNKP-225ENST00000636214 SPIN3Q5JUX0 258 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 LHFPL4Q7Z7J7 247 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 FAM110DQ8TAY7 271 aaPredicted RBP14.54□□□□□ -0.08
PNKP-225ENST00000636214 NDNFQ8TB73 568 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 MALSU1Q96EH3 234 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 C4orf36Q96KX1 117 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 CHST6Q9GZX3 395 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 EXOSC4Q9NPD3 245 aaKnown RBP14.54□□□□□ -0.08
PNKP-225ENST00000636214 LINC00312Q9Y6C7 94 aa14.54□□□□□ -0.08
PNKP-225ENST00000636214 CMYA5Q8N3K9 4069 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 FUOMA2VDF0 154 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 MGST3O14880 152 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 MPZL2O60487 215 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 PEX14O75381 377 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 ISG15P05161 165 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 RPSAP08865 295 aaKnown RBP14.53□□□□□ -0.08
PNKP-225ENST00000636214 BCL3P20749 454 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 CCR9P51686 369 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 DLX6P56179 175 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 FDX2Q6P4F2 183 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 ZBTB49Q6ZSB9 765 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 CBR4Q8N4T8 237 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 AJUBAQ96IF1 538 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 Q96MT0 163 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 C9orf16Q9BUW7 83 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 SEBOXQ9HB31 216 aaPredicted RBP14.53□□□□□ -0.08
PNKP-225ENST00000636214 FRRS1LQ9P0K9 344 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 SIGLEC9Q9Y336 463 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 SESN1Q9Y6P5 492 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 KIAA2026Q5HYC2 2103 aa14.53□□□□□ -0.08
PNKP-225ENST00000636214 TMEM82A0PJX8 343 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 VGLL3A8MV65 326 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 ODF3BA8MYP8 253 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 SH2D1BO14796 132 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 FADS2O95864 444 aaKnown RBP14.52□□□□□ -0.09
PNKP-225ENST00000636214 IGHA1P01876 353 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 DUSP1P28562 367 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 EFNB2P52799 333 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 PDZK1IP1Q13113 114 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 ALKBH1Q13686 389 aaKnown RBP14.52□□□□□ -0.09
PNKP-225ENST00000636214 ZNF146Q15072 292 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 SSX2Q16385 188 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 ZNF626Q68DY1 528 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 KLHDC1Q8N7A1 406 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 TPRX1Q8N7U7 411 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 OR13C9Q8NGT0 318 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 RFT1Q96AA3 541 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 MBOAT4Q96T53 435 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 ALG8Q9BVK2 526 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 CDCA4Q9BXL8 241 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 COMMD4Q9H0A8 199 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 IL36RNQ9UBH0 155 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 GSTK1Q9Y2Q3 226 aa14.52□□□□□ -0.09
PNKP-225ENST00000636214 TRGV10A0A0A0MS01 117 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 IGKV1-9A0A0C4DH69 117 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 SIRPB1O00241 398 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 F2RL2O00254 374 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 TSPAN15O95858 294 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 VSIG10L2P0DP72 767 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 CALCBP10092 127 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 NPBWR2P48146 333 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 NANOS3P60323 173 aaKnown RBP14.51□□□□□ -0.09
PNKP-225ENST00000636214 MRPL28Q13084 256 aaKnown RBP14.51□□□□□ -0.09
PNKP-225ENST00000636214 OR11H6Q8NGC7 330 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 LGALS12Q96DT0 336 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 PELI1Q96FA3 418 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 GAL3ST2Q9H3Q3 398 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 TCF19Q9Y242 345 aa14.51□□□□□ -0.09
PNKP-225ENST00000636214 EXOGQ9Y2C4 368 aaKnown RBP14.51□□□□□ -0.09
PNKP-225ENST00000636214 FAM90A8PA6NJQ4 464 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 H3BNX3 289 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 J3QRE1 110 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 HCKP08631 526 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 ZNF44P15621 663 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 ARHGDIBP52566 201 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 P2RX3P56373 397 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 SLC34A1Q06495 639 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 IL18R1Q13478 541 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 GALEQ14376 348 aa14.5□□□□□ -0.09
PNKP-225ENST00000636214 MINOS1Q5TGZ0 78 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms