RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TUSC5Q8IXB3 177 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 BTF3L4Q96K17 158 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 RAB40CQ96S21 281 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 SRXN1Q9BYN0 137 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 TREM2Q9NZC2 230 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 TRDCB7Z8K6 153 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 MSTNO14793 375 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 NXPH2O95156 264 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 IGLV3-1P01715 115 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 MRPL41Q8IXM3 137 aaKnown RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 MOB3AQ96BX8 217 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 SULT4A1Q9BR01 284 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 CNTNAP3Q9BZ76 1288 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM100Q9NV29 134 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 VSIG4Q9Y279 399 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 LNP1A1A4G5 178 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 CSRP1P21291 193 aaKnown RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 FAM3AP98173 230 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 SHEQ5VZ18 495 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 SKA3Q8IX90 412 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 PAQR4Q8N4S7 273 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 ZIC4Q8N9L1 334 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 PINX1Q96BK5 328 aaKnown RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 SPACA5Q96QH8 159 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM30CPA0ZSE6 113 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 ZSCAN5BA6NJL1 495 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 LRRC3CA6NJW4 275 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 CRYAAP02489 173 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 FCGR3AP08637 254 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 RHEBQ15382 184 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 HAGHLQ6PII5 290 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 DHRS11Q6UWP2 260 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 FAM214BQ7L5A3 538 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 LHFPL1Q86WI0 220 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 LYPD6Q86Y78 171 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 LRTM2Q8N967 370 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF709Q8N972 641 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 OR1K1Q8NGR3 316 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 CD300LFQ8TDQ1 290 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF775Q96BV0 537 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 REPIN1Q9BWE0 567 aaKnown RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 SLC7A10Q9NS82 523 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 LEUTXA8MZ59 168 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 F8W036 122 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 TGOLN2O43493 480 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 MAGEA5P43359 124 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 CAV2P51636 162 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 B3GALT5-AS1P59052 145 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 LCN10Q6JVE6 187 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 C6orf201Q7Z4U5 140 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF845Q96IR2 970 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 LGALS8O00214 317 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 MBPP02686 304 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 CBR1P16152 277 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 RPS18P62269 152 aaKnown RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 UBE2V2Q15819 145 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 SPINK14Q6IE38 97 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 GALNT11Q8NCW6 608 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 CPEB3Q8NE35 698 aaKnown RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 OR13G1Q8NGZ3 307 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 CMBLQ96DG6 245 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 FBXO17Q96EF6 278 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 ASF1BQ9NVP2 202 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF705EA8MWA4 302 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 PJVKQ0ZLH3 352 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 MOGAT2Q3SYC2 334 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 DPPA3Q6W0C5 159 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 FOXRED2Q8IWF2 684 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 MMP26Q9NRE1 261 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 PRELID3BQ9Y3B1 194 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 PRR33A8MZF0 331 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 RBMXL2O75526 392 aaKnown RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 PPYP01298 95 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 S100A9P06702 114 aaKnown RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM50BP56557 158 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 PLA2G2CQ5R387 149 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM105Q8N8V8 129 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 RNF166Q96A37 237 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-210ENST00000635776 PARP11Q9NR21 331 aa3.96□□□□□ -1.78
SCN1A-210ENST00000635776 NMBP08949 121 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CD59P13987 128 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CLDN18P56856 261 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 MIDNQ504T8 468 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 GGNBP1Q5YKI7 109 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 GVQW1Q8N7I0 195 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ADAMTS17Q8TE56 1095 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 NCOR1O75376 2440 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 C3orf85A0A1B0GTC6 90 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 C9orf172C9J069 976 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 MKRN2OSH3BPM6 223 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 SLC25A6P12236 298 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 KRTCAP3Q53RY4 240 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 COLCA1Q6ZS62 124 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 GGNQ86UU5 652 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 BVESQ8NE79 360 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 OR11H4Q8NGC9 324 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ABHD3Q8WU67 409 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 FAAP24Q9BTP7 215 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CRYM-AS1A6NIL9 109 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ANGPTL7O43827 346 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms