RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 DOC2AQ14183 400 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CLINT1Q14677 625 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ARHGAP19Q14CB8 494 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 PDK3Q15120 406 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 PON3Q15166 354 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TGFBIQ15582 683 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 POU2AF1Q16633 256 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 DEFB113Q30KQ7 82 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ALKBH6Q3KRA9 238 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 NKAIN1Q4KMZ8 207 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 DEFB134Q4QY38 66 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 LRRC23Q53EV4 343 aaPredicted RBP0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SMUG1Q53HV7 270 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SFT2D3Q587I9 215 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ACSBG2Q5FVE4 666 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF684Q5T5D7 378 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 C1orf185Q5T7R7 199 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ANKRD22Q5VYY1 191 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF470Q6ECI4 717 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 OR2A2Q6IF42 318 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 PRMT9Q6P2P2 845 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SBSNQ6UWP8 590 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TAS2R42Q7RTR8 314 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 PEX26Q7Z412 305 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SNX20Q7Z614 316 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CMC1Q7Z7K0 106 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SETD3Q86TU7 594 aaPredicted RBP0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 BIVMQ86UB2 503 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 DOLPP1Q86YN1 238 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CALHM1Q8IU99 346 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM71AQ8IYT1 594 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 UMODL1-AS1Q8N2C9 162 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 LYPD1Q8N2G4 141 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TRAM1L1Q8N609 369 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF557Q8N988 423 aaPredicted RBP0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SNX31Q8N9S9 440 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TTC29Q8NA56 475 aaPredicted RBP0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TMEM35BQ8NCS4 154 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 OR2L3Q8NG85 312 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 OR8K1Q8NGG5 319 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 OR10G4Q8NGN3 311 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 OR1L4Q8NGR5 311 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 OR2Y1Q8NGV0 311 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 COQ8AQ8NI60 647 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 RHEBL1Q8TAI7 183 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM110BQ8TC76 370 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ACTL9Q8TC94 416 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CA5BP1Q8WTZ4 195 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 LCN9Q8WX39 176 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SMIM10Q96HG1 83 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 PLEKHA8Q96JA3 519 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CATSPER2Q96P56 530 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 OLFM3Q96PB7 478 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 PSKH2Q96QS6 385 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CAMK2N2Q96S95 79 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CNN2Q99439 309 aaKnown RBP0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 P2RX4Q99571 388 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CHP1Q99653 195 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 GPR21Q99679 349 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 CCL19Q99731 98 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 FOXC2Q99958 501 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 KCTD14Q9BQ13 255 aaPredicted RBP0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TBL1YQ9BQ87 522 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SELENOSQ9BQE4 189 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC39A3Q9BRY0 314 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TIMM29Q9BSF4 260 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TMEM43Q9BTV4 400 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC25A2Q9BXI2 301 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 EBPLQ9BY08 206 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TTTY12Q9BZ98 90 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 MFFQ9GZY8 342 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 OR52A5Q9H2C5 316 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 HAUS4Q9H6D7 363 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 KIR3DX1Q9H7L2 352 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 FN3KRPQ9HA64 309 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 FANCEQ9HB96 536 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 NMRAL1Q9HBL8 299 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 WFDC1Q9HC57 220 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 HMG20AQ9NP66 347 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ISYNA1Q9NPH2 558 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 RBM22Q9NW64 420 aaKnown RBP eCLIP0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SMOXQ9NWM0 555 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 HRASLS2Q9NWW9 162 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 DCAF16Q9NXF7 216 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 EURLQ9NYK6 297 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 IFNKQ9P0W0 207 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNRD1Q9P1U0 126 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC17A7Q9P2U7 560 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 XCL2Q9UBD3 114 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 ENOPH1Q9UHY7 261 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 FARSAQ9Y285 508 aaKnown RBP0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 IKBKGQ9Y6K9 419 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 TRRAPQ9Y4A5 3859 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 PKD1L1Q8TDX9 2849 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 DNAH3Q8TD57 4116 aa0.62□□□□□ -2.31
SMARCB1-209ENST00000635578 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 NOTCH1P46531 2555 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 NIPBLQ6KC79 2804 aaeCLIP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 KMT2CQ8NEZ4 4911 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 TRAV26-1A0A087WT03 109 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms