RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 KISS1Q15726 138 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 XAF1Q6GPH4 301 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 METAP1DQ6UB28 335 aaPredicted RBP12.89□□□□□ -0.35
LINC00339-207ENST00000634712 AHSA2Q719I0 299 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 SATL1Q86VE3 508 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 SMIM19Q96E16 107 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 SNX22Q96L94 193 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 GPER1Q99527 375 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 TNFRSF19Q9NS68 423 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 A0A1W2PRD5 423 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 A0A1W2PRF3 423 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 A0A1W2PRM7 423 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 TMEM89A2RUT3 159 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 H0YJX3 145 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 CLDN34H7C241 214 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 SH2D1BO14796 132 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 RNASE1P07998 156 aaKnown RBP12.88□□□□□ -0.35
LINC00339-207ENST00000634712 GABRR1P24046 479 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 TAS2R43P59537 309 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 PRB3Q04118 309 aaPredicted RBP12.88□□□□□ -0.35
LINC00339-207ENST00000634712 TMEM200BQ69YZ2 307 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 Q6YL49 198 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 PPP1R35Q8TAP8 253 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 FBLIM1Q8WUP2 373 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 TMEM106AQ96A25 262 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 PRDM13Q9H4Q3 707 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 RHOFQ9HBH0 211 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 SCN3BQ9NY72 215 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
LINC00339-207ENST00000634712 SF3B6Q9Y3B4 125 aaKnown RBP12.88□□□□□ -0.35
LINC00339-207ENST00000634712 A0A0U1RQK1 487 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 RNASEK-C17orf49H0YIS7 233 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 HAX1O00165 279 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 KDM4BO94953 1096 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 DUSP1P28562 367 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 UBE2E1P51965 193 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 AQP4P55087 323 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 DLX1P56177 255 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 PPP3R1P63098 170 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 KLRD1Q13241 179 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 ZNF146Q15072 292 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 SPIN3Q5JUX0 258 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 LAIR2Q6ISS4 152 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 C16orf87Q6PH81 154 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 OR8H2Q8N162 312 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 NRG4Q8WWG1 115 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 GHSRQ92847 366 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 C1orf147Q96MC9 270 aaPredicted RBP12.87□□□□□ -0.35
LINC00339-207ENST00000634712 HEXA-AS1Q9H8Q6 139 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 UNKLQ9H9P5 680 aaKnown RBP12.87□□□□□ -0.35
LINC00339-207ENST00000634712 SEBOXQ9HB31 216 aaPredicted RBP12.87□□□□□ -0.35
LINC00339-207ENST00000634712 HMG20AQ9NP66 347 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 EXOSC4Q9NPD3 245 aaKnown RBP12.87□□□□□ -0.35
LINC00339-207ENST00000634712 TAS2R4Q9NYW5 299 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 IL36RNQ9UBH0 155 aa12.87□□□□□ -0.35
LINC00339-207ENST00000634712 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
LINC00339-207ENST00000634712 PTGES3LE9PB15 166 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 NPFFO15130 113 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 ZNF737O75373 536 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 PAHP00439 452 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 LALBAP00709 142 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 CRYBA1P05813 215 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 C21orf33P30042 268 aaPredicted RBP12.86□□□□□ -0.35
LINC00339-207ENST00000634712 EDDM3AQ14507 147 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 GRK1Q15835 563 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 C6orf141Q5SZD1 244 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 DMKNQ6E0U4 476 aaPredicted RBP12.86□□□□□ -0.35
LINC00339-207ENST00000634712 RNF144BQ7Z419 303 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 ZFP41Q8N8Y5 198 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 RPS4Y2Q8TD47 263 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 SSMEM1Q8WWF3 244 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 RGP1Q92546 391 aaPredicted RBP12.86□□□□□ -0.35
LINC00339-207ENST00000634712 TNFRSF14Q92956 283 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 MYDGFQ969H8 173 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
LINC00339-207ENST00000634712 IGKV1-12A0A0C4DH73 117 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 PNMA8CA0A1B0GUJ8 204 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 TMEM82A0PJX8 343 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 MEIOCA2RUB1 952 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 SIRPB1O00241 398 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 IGKV1D-12P01611 117 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 MELTFP08582 738 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 FBP1P09467 338 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 HKR1P10072 659 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 BMXP51813 675 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 WNT4P56705 351 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 ERVFRD-1P60508 538 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
LINC00339-207ENST00000634712 SCN1BQ07699 218 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 ACSM1Q08AH1 577 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 FOXL1Q12952 345 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 YIF1BQ5BJH7 314 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 TMEM86BQ8N661 226 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 C3orf56Q8N813 242 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 TNFAIP8L1Q8WVP5 186 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 FAM192AQ9GZU8 254 aa12.85□□□□□ -0.35
LINC00339-207ENST00000634712 CHST6Q9GZX3 395 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms