RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 SNAPC1Q16533 368 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 RTN4RL2Q86UN3 420 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 ELMOD2Q8IZ81 293 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 OR52N4Q8NGI2 321 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 EMG1Q92979 244 aaKnown RBP12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 PLEKHA1Q9HB21 404 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 UBE2J1Q9Y385 318 aaPredicted RBP12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 R4GMQ9 66 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 A0A1B0GTI1 187 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 GNGT2O14610 69 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 SNX3O60493 162 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 SRSF10O75494 262 aaKnown RBP12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 RAP2AP10114 183 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 CEACAM3P40198 252 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 RPL23AP62750 156 aaKnown RBP12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 TMEM236Q5W0B7 351 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 ZNF322Q6U7Q0 402 aaPredicted RBP12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 SLC25A26Q70HW3 274 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 ZNF329Q86UD4 541 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 ENTHD1Q8IYW4 607 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 TFAP2CQ92754 450 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 APOL4Q9BPW4 351 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 GAL3ST2Q9H3Q3 398 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 GLS2Q9UI32 602 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 PCDHGB5Q9Y5G0 923 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 SNX5Q9Y5X3 404 aa12.42□□□□□ -0.42
PDLIM3-213ENST00000629667 FAM172BPA6NC97 362 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 CCDC182A6NF36 153 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 NUDT19A8MXV4 375 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 MGST3O14880 152 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 MAGEB4O15481 346 aaPredicted RBP12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 PSPNO60542 156 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 MNDAP41218 407 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 FUT6P51993 359 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 CXCR4P61073 352 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 UBE2V2Q15819 145 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 PRAMEF5Q5TYX0 476 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 PLEKHG7Q6ZR37 379 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 C8orf86Q6ZUL3 223 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 TMEM179BQ7Z7N9 219 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 CREB3L1Q96BA8 519 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 CNN2Q99439 309 aaKnown RBP12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 SEBOXQ9HB31 216 aaPredicted RBP12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 TVP23BQ9NYZ1 205 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 IL36RNQ9UBH0 155 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 HHLA2Q9UM44 414 aa12.41□□□□□ -0.42
PDLIM3-213ENST00000629667 IGKV1-27A0A075B6S5 117 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 TRGV10A0A0A0MS01 117 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 H0YHG0 523 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 C3orf84H3BNL1 204 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 TOR1AO14656 332 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 RAMP3O60896 148 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 IGLV1-47P01700 117 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 CDK2P24941 298 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 DUSP1P28562 367 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 ERP29P30040 261 aaKnown RBP12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 SLC6A1P30531 599 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 MYCNOSP40205 109 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 MNAT1P51948 309 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 P2RX3P56373 397 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 MS4A2Q01362 244 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 ZNF91Q05481 1191 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 TRIM25Q14258 630 aaKnown RBP12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 ODF4Q2M2E3 257 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 KLHL22Q53GT1 634 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 CCDC144NLQ6NUI1 221 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 HEPN1Q6WQI6 88 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 Q6ZSR3 168 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 OR2W3Q7Z3T1 314 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 Q8IYB0 196 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 BORCS8Q96FH0 119 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 SLC25A19Q9HC21 320 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 ZFP57Q9NU63 452 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 MOB4Q9Y3A3 225 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 HSPE1-MOB4S4R3N1 261 aa12.4□□□□□ -0.42
PDLIM3-213ENST00000629667 H3BSH0 61 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 BUB1B-PAK6H3BSN5 160 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 GATBO75879 557 aaKnown RBP12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 CYB5AP00167 134 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM106CPP0CH98 169 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 OR3A4PP47883 348 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 SNU13P55769 128 aaKnown RBP12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 KPNB1Q14974 876 aaKnown RBP12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 TPTE2P1Q5T6R2 138 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 C18orf65Q6ZTR6 163 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM58AQ8N1B3 248 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 ARHGAP24Q8N264 748 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 CHPT1Q8WUD6 406 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 LRGUKQ96M69 825 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 ZNF286AQ9HBT8 521 aa12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 RBFOX1Q9NWB1 397 aaKnown RBP12.39□□□□□ -0.43
PDLIM3-213ENST00000629667 FUOMA2VDF0 154 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 ZNF670-ZNF695F2Z2N8 137 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 SYT7O43581 403 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 RPP14O95059 124 aaKnown RBP12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 ZFPL1O95159 310 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 SERPINA3P01011 423 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms