RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 OR52N4Q8NGI2 321 aa9.11□□□□□ -0.95
DDX41-219ENST00000629036 TSEN15Q8WW01 171 aaKnown RBP9.11□□□□□ -0.95
DDX41-219ENST00000629036 CNTD2Q9H8S5 307 aa9.11□□□□□ -0.95
DDX41-219ENST00000629036 HMG20AQ9NP66 347 aa9.11□□□□□ -0.95
DDX41-219ENST00000629036 TRRAPQ9Y4A5 3859 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 TRBV23-1A0A0A0MS06 115 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 PNMA8CA0A1B0GUJ8 204 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 H0YHG0 523 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 RNASEK-C17orf49H0YIS7 233 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 PSPNO60542 156 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 TOX4O94842 621 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 ALDOBP05062 364 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 OCM2P0CE71 109 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 CFPP27918 469 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 VHLP40337 213 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 OR3A1P47881 315 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 HSPA13P48723 471 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 TAS2R43P59537 309 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 PRB3Q04118 309 aaPredicted RBP9.1□□□□□ -0.95
DDX41-219ENST00000629036 ZNF273Q14593 569 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 Q499Y3 187 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 YIF1BQ5BJH7 314 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 Q6P435 159 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 VMO1Q7Z5L0 202 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 MKXQ8IYA7 352 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 Q8IYB0 196 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 FAM58AQ8N1B3 248 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 STX19Q8N4C7 294 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 PIP4P2Q8N4L2 257 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 ZSCAN4Q8NAM6 433 aaPredicted RBP9.1□□□□□ -0.95
DDX41-219ENST00000629036 TMEM185AQ8NFB2 350 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 OR5D14Q8NGL3 314 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 EMG1Q92979 244 aaKnown RBP9.1□□□□□ -0.95
DDX41-219ENST00000629036 AJUBAQ96IF1 538 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 DERL3Q96Q80 235 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 OR14A2Q96R54 314 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 PCGF1Q9BSM1 259 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 FAM234AQ9H0X4 552 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 VCX3BQ9H321 246 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 ZNF581Q9P0T4 197 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 OR14J1Q9UGF5 321 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 RAB26Q9ULW5 256 aa9.1□□□□□ -0.95
DDX41-219ENST00000629036 DNAJC9-AS1A6NH13 148 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 PTGES3LE9PB15 166 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 M0R1W7 72 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 MYL12BO14950 172 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 INMTO95050 263 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 HAND1O96004 215 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 CALCBP10092 127 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 NDUFB7P17568 137 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 CELP19835 753 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 RAB3AP20336 220 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 LMO1P25800 156 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 DUSP1P28562 367 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 OR3A4PP47883 348 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 KLRD1Q13241 179 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 SPIN3Q5JUX0 258 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 METTL11BQ5VVY1 283 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 TMEM200BQ69YZ2 307 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 ELP2Q6IA86 826 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 UNQ9370/PRO34162Q6UXP9 181 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 C12orf54Q6X4T0 127 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 C1orf122Q6ZSJ8 110 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 OR8H2Q8N162 312 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.09□□□□□ -0.95
DDX41-219ENST00000629036 PXT1Q8NFP0 134 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 H1FXQ92522 213 aaKnown RBP9.09□□□□□ -0.95
DDX41-219ENST00000629036 MND1Q9BWT6 205 aa9.09□□□□□ -0.95
DDX41-219ENST00000629036 PPIL3Q9H2H8 161 aaKnown RBP9.09□□□□□ -0.95
DDX41-219ENST00000629036 RRP15Q9Y3B9 282 aaKnown RBP9.09□□□□□ -0.95
DDX41-219ENST00000629036 CMYA5Q8N3K9 4069 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 IGHV1-69DA0A0B4J2H0 117 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 IGHV1-69P01742 117 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 HCKP08631 526 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 CCL3L1P16619 93 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 PRKACAP17612 351 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 ERVFRD-1P60508 538 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 UBA52P62987 128 aaKnown RBP9.08□□□□□ -0.96
DDX41-219ENST00000629036 SCGB2A2Q13296 93 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 MED21Q13503 144 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 PDCD1Q15116 288 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 SPHARQ15513 63 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 DEFB112Q30KQ8 113 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 FAM27D1Q5T7N8 215 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 PRSS48Q7RTY5 328 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 BPIFB2Q8N4F0 458 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 OR4S1Q8NGB4 309 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 OR51T1Q8NGJ9 327 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 ZNF418Q8TF45 676 aaPredicted RBP9.08□□□□□ -0.96
DDX41-219ENST00000629036 ZFAND2BQ8WV99 257 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 LHX4Q969G2 390 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 MYDGFQ969H8 173 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 CYYR1Q96J86 154 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 CNBD2Q96M20 576 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 ZNF184Q99676 751 aaPredicted RBP9.08□□□□□ -0.96
DDX41-219ENST00000629036 SUCNR1Q9BXA5 334 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 RHOFQ9HBH0 211 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 TMEM138Q9NPI0 162 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 SIRT7Q9NRC8 400 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms