RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 NUDCD2Q8WVJ2 157 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 ITLN2Q8WWU7 325 aaPredicted RBP6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 ST8SIA4Q92187 359 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 EMG1Q92979 244 aaKnown RBP6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 ELMOD3Q96FG2 381 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 NRIP2Q9BQI9 281 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 OCSTAMPQ9BR26 566 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 IFT22Q9H7X7 185 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 FAIMQ9NVQ4 179 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 RASL12Q9NYN1 266 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 GLS2Q9UI32 602 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 ANAPC10Q9UM13 185 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 PLEKHA6Q9Y2H5 1048 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 KCNK7Q9Y2U2 307 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 RNF115Q9Y4L5 304 aa6.4□□□□□ -1.38
PTP4A1-206ENST00000627002 PIEZO2Q9H5I5 2752 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 hCG_2014768A0A024R1R8 64 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 MEIS3P1A6NDR6 274 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 A6NLC8 198 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 SSX4O60224 188 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 SSX5O60225 188 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 ZG16O60844 167 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 RHBDL1O75783 438 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 OR7C1O76099 320 aaPredicted RBP6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 NXPH2O95156 264 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 RAB3DO95716 219 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 F12P00748 615 aaPredicted RBP6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 CD74P04233 296 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 ADH4P08319 380 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 NAT1P18440 290 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 DTYMKP23919 212 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 GRNP28799 593 aaKnown RBP6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 APOBEC3AP31941 199 aaPredicted RBP6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 BTCP35070 178 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 SERPINF1P36955 418 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 CFHR2P36980 270 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 KIR2DL3P43628 341 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 MEF2DQ14814 521 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 CDSNQ15517 529 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 LINC01559Q495D7 138 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 PLA1AQ53H76 456 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 SIGIRRQ6IA17 410 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 STEAP1BQ6NZ63 245 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 C6orf201Q7Z4U5 140 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 HOGA1Q86XE5 327 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 OR10Z1Q8NGY1 313 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 ERGIC1Q969X5 290 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 CREB3L1Q96BA8 519 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 MEGF10Q96KG7 1140 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 CMSS1Q9BQ75 279 aaKnown RBP6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 CACNG6Q9BXT2 260 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 CHST6Q9GZX3 395 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 FN3KRPQ9HA64 309 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 HES4Q9HCC6 221 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 MCUBQ9NWR8 336 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 RCC2Q9P258 522 aaKnown RBP6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 NLKQ9UBE8 527 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 IL19Q9UHD0 177 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 ELF5Q9UKW6 265 aaPredicted RBP6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 EDARQ9UNE0 448 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 NUBP2Q9Y5Y2 271 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 COL6A6A6NMZ7 2263 aa6.39□□□□□ -1.39
PTP4A1-206ENST00000627002 NAV2Q8IVL1 2488 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 hCG_1807616A0A1W2PRN6 198 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 B9A039 149 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 DISC1C4P0D8 188 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 MCRIP1C9JLW8 97 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 E7EQL1 145 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 F8VVB4 439 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 F8VWA3 439 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 SH2D1BO14796 132 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 DEGS1O15121 323 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 SPRY3O43610 288 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 IGHV1-46P01743 117 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 CD3DP04234 171 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 TCRBP04435 133 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 CD55P08174 381 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 AMY2BP19961 511 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 GIFP27352 417 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 HLA-DMAP28067 261 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 GATA4P43694 442 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 SNU13P55769 128 aaKnown RBP6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 RAG2P55895 527 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 TAS2R46P59540 309 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 BTG1P62324 171 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 TNFAIP6P98066 277 aaPredicted RBP6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 IKZF1Q13422 519 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 RBM39Q14498 530 aaKnown RBP6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 ZNF146Q15072 292 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 ZMYND11Q15326 602 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 EFNB3Q15768 340 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 SMIM21Q3B7S5 101 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 ZNF672Q499Z4 452 aaPredicted RBP6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 RNASE10Q5GAN6 216 aaKnown RBP6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 FAM209AQ5JX71 171 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 ATAD3CQ5T2N8 411 aa6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 RSBN1Q5VWQ0 802 aaPredicted RBP6.38□□□□□ -1.39
PTP4A1-206ENST00000627002 PRAMEF6Q5VXH4 476 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms