RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 Q6ZQT7 251 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 CYP4Z1Q86W10 505 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 FAM58AQ8N1B3 248 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 OR52K1Q8NGK4 314 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 RBPMSQ93062 196 aaKnown RBP1.97□□□□□ -2.09
CDKL5-207ENST00000624700 QKIQ96PU8 341 aaKnown RBP eCLIP1.97□□□□□ -2.093e-6■■■■□ 21.4
CDKL5-207ENST00000624700 VAT1Q99536 393 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 PKMYT1Q99640 499 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 C20orf144Q9BQM9 153 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 PORCNQ9H237 461 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 RHOFQ9HBH0 211 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 TMEM38BQ9NVV0 291 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 ZNF586Q9NXT0 402 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 ANXA10Q9UJ72 324 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 CHTOPQ9Y3Y2 248 aaKnown RBP1.97□□□□□ -2.09
CDKL5-207ENST00000624700 CACNA1DQ01668 2161 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 SRCAPQ6ZRS2 3230 aa1.97□□□□□ -2.09
CDKL5-207ENST00000624700 TRAV8-7A0A075B6U6 113 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 LOC389332A0A1B0GUA5 103 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 PSCAO43653 123 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 GMDSO60547 372 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 ZNF404Q494X3 552 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 PYDC2Q56P42 97 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 UBE2NLQ5JXB2 153 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 ZNF660Q6AZW8 331 aaPredicted RBP1.96□□□□□ -2.1
CDKL5-207ENST00000624700 SMARCD3Q6STE5 483 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 ASCL4Q6XD76 172 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 TMPPEQ6ZT21 453 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 AMN1Q8IY45 258 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 ZFP62Q8NB50 900 aaPredicted RBP1.96□□□□□ -2.1
CDKL5-207ENST00000624700 BPIFB6Q8NFQ5 453 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 ANKHQ9HCJ1 492 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 DIABLOQ9NR28 239 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 SDHAF2Q9NX18 166 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 R4GN34 69 aa1.96□□□□□ -2.1
CDKL5-207ENST00000624700 RFXANKO14593 260 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 SLC31A1O15431 190 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 IGHV3-53P01767 116 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 BGNP21810 368 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 CD9P21926 228 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 CPN2P22792 545 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 ELK4P28324 431 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 DEKP35659 375 aaKnown RBP1.95□□□□□ -2.1
CDKL5-207ENST00000624700 DNASE1L1P49184 302 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 GZMMP51124 257 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 XKP51811 444 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 KLF3P57682 345 aaPredicted RBP1.95□□□□□ -2.1
CDKL5-207ENST00000624700 DYNC1I2Q13409 638 aaKnown RBP1.95□□□□□ -2.1
CDKL5-207ENST00000624700 TMEM144Q7Z5S9 345 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 LINC00596Q86U02 117 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 ASCC1Q8N9N2 400 aaKnown RBP1.95□□□□□ -2.1
CDKL5-207ENST00000624700 ACTL9Q8TC94 416 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 MAP1LC3CQ9BXW4 147 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 SHCBP1LQ9BZQ2 653 aa1.95□□□□□ -2.1
CDKL5-207ENST00000624700 NRCAMQ92823 1304 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 ENTPD6O75354 484 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 CPSF4O95639 269 aaKnown RBP1.94□□□□□ -2.1
CDKL5-207ENST00000624700 HLA-AP01891 365 aaKnown RBP1.94□□□□□ -2.1
CDKL5-207ENST00000624700 RLN2P04090 185 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 SCGB1C2P0DMR2 95 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 LIPCP11150 499 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 CCL23P55773 120 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 PDZD11Q5EBL8 140 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 PID1Q7Z2X4 250 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 LINC00337Q8N6G1 96 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 PHOSPHO2Q8TCD6 241 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 SCGB1C1Q8TD33 95 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 C22orf15Q8WYQ4 148 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 PYURFQ96I23 114 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 CHID1Q9BWS9 393 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 ASB7Q9H672 318 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 DNAJC27Q9NZQ0 273 aa1.94□□□□□ -2.1
CDKL5-207ENST00000624700 C14orf166Q9Y224 244 aaKnown RBP1.94□□□□□ -2.1
CDKL5-207ENST00000624700 IGKV1OR2-108A0A075B7D4 117 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 IGHV3-21A0A0B4J1V1 117 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 ZMPSTE24O75844 475 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 VAPBO95292 243 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 PRPS1L1P21108 318 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 PTNP21246 168 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 PRTN3P24158 256 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 IL12BP29460 328 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 TGFBR2P37173 567 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 FOXA1P55317 472 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 TNFRSF9Q07011 255 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 ZNF141Q15928 474 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 NDUFAF6Q330K2 333 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 LIN9Q5TKA1 542 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 SYS1Q8N2H4 156 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 LY6G5BQ8NDX9 201 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
CDKL5-207ENST00000624700 NELFBQ8WX92 580 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 CDKL2Q92772 493 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 CIB1Q99828 191 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 UTP23Q9BRU9 249 aaKnown RBP1.93□□□□□ -2.1
CDKL5-207ENST00000624700 COPS4Q9BT78 406 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 NXF2Q9GZY0 626 aaKnown RBP1.93□□□□□ -2.1
CDKL5-207ENST00000624700 CHRNA10Q9GZZ6 450 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 PLEKHA1Q9HB21 404 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 ACOT13Q9NPJ3 140 aa1.93□□□□□ -2.1
CDKL5-207ENST00000624700 ICOSQ9Y6W8 199 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms