RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 PPA2Q9H2U2 334 aa10.67□□□□□ -0.7
ATRX-208ENST00000622960 EXOSC4Q9NPD3 245 aaKnown RBP10.67□□□□□ -0.7
ATRX-208ENST00000622960 MTCH1Q9NZJ7 389 aa10.67□□□□□ -0.7
ATRX-208ENST00000622960 FRRS1LQ9P0K9 344 aa10.67□□□□□ -0.7
ATRX-208ENST00000622960 EXOGQ9Y2C4 368 aaKnown RBP10.67□□□□□ -0.7
ATRX-208ENST00000622960 LOC100130705A0A1B0GUX0 176 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 IRGMA1A4Y4 181 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 SH2D1BO14796 132 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 ARG1P05089 322 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 ZNF728P0DKX0 622 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 SNU13P55769 128 aaKnown RBP10.66□□□□□ -0.7
ATRX-208ENST00000622960 RELBQ01201 579 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 DYNC1I2Q13409 638 aaKnown RBP10.66□□□□□ -0.7
ATRX-208ENST00000622960 MED21Q13503 144 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 ZNF273Q14593 569 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 AANATQ16613 207 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 LHFPL3Q86UP9 236 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 OR13C9Q8NGT0 318 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 OR5AK2Q8NH90 309 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 LINC01006Q8NI28 216 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 ADAT3Q96EY9 351 aaPredicted RBP10.66□□□□□ -0.7
ATRX-208ENST00000622960 PELI1Q96FA3 418 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 RDH12Q96NR8 316 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 RHOFQ9HBH0 211 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 TCF7L1Q9HCS4 588 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 DHDHQ9UQ10 334 aa10.66□□□□□ -0.7
ATRX-208ENST00000622960 TBL2Q9Y4P3 447 aaKnown RBP10.66□□□□□ -0.7
ATRX-208ENST00000622960 IGKV1-27A0A075B6S5 117 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 J3QRE1 110 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 MGST3O14880 152 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 CD2P06729 351 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 BCL3P20749 454 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 GABRA5P31644 462 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 BMXP51813 675 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 NANOS3P60323 173 aaKnown RBP10.65□□□□□ -0.7
ATRX-208ENST00000622960 PDZK1IP1Q13113 114 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 LY6EQ16553 131 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 C11orf88Q6PI97 169 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 Q6ZSV7 163 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 SERPINA12Q8IW75 414 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 OR2T6Q8NHC8 308 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 GAL3ST2Q9H3Q3 398 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 ZCCHC4Q9H5U6 513 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 C16orf95Q9H693 158 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 RBFOX1Q9NWB1 397 aaKnown RBP10.65□□□□□ -0.7
ATRX-208ENST00000622960 FAM118AQ9NWS6 357 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 SMPD3Q9NY59 655 aaPredicted RBP10.65□□□□□ -0.7
ATRX-208ENST00000622960 PITPNC1Q9UKF7 332 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 LINC00312Q9Y6C7 94 aa10.65□□□□□ -0.7
ATRX-208ENST00000622960 C17orf98A8MV24 154 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 SULT1B1O43704 296 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 ZNF737O75373 536 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 CLPXO76031 633 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 IGHA1P01876 353 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 ZNF44P15621 663 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 MYL12AP19105 171 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 ARHGDIBP52566 201 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 ARSJQ5FYB0 599 aaPredicted RBP10.64□□□□□ -0.71
ATRX-208ENST00000622960 TMPRSS11AQ6ZMR5 421 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 SAXO1Q8IYX7 474 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 SETD9Q8NE22 299 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 RHOXF1Q8NHV9 184 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 RPS4Y2Q8TD47 263 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 RFT1Q96AA3 541 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 GPER1Q99527 375 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 CITED1Q99966 193 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 NPFFR1Q9GZQ6 430 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 CHST6Q9GZX3 395 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 MEGF9Q9H1U4 602 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 SEBOXQ9HB31 216 aaPredicted RBP10.64□□□□□ -0.71
ATRX-208ENST00000622960 AMBNQ9NP70 447 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 C8orf4Q9NR00 106 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 CHCHD3Q9NX63 227 aaKnown RBP10.64□□□□□ -0.71
ATRX-208ENST00000622960 ERVK13-1Q9NX77 482 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 GSTK1Q9Y2Q3 226 aa10.64□□□□□ -0.71
ATRX-208ENST00000622960 TRGV10A0A0A0MS01 117 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 IGKV1-9A0A0C4DH69 117 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 OR4C45A6NMZ5 311 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 F8VVB4 439 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 F8VWA3 439 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 SIRPB1O00241 398 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 TSPAN9O75954 239 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 MT-ND2P03891 347 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 IGHV1-8P0DP01 117 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 TMEM225BP0DP42 221 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 GABRB1P18505 474 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 DUSP1P28562 367 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 NPBWR2P48146 333 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 ZNF146Q15072 292 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 FAM189A2Q15884 450 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 OR52W1Q6IF63 320 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 HCP5Q6MZN7 132 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 Q6ZTK2 550 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 CHST4Q8NCG5 386 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 OR51A4Q8NGJ6 313 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 OR5D18Q8NGL1 313 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 NDNFQ8TB73 568 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 MMP27Q9H306 513 aa10.63□□□□□ -0.71
ATRX-208ENST00000622960 RANBP3Q9H6Z4 567 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms