RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ALG5Q9Y673 324 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ADAMTSL3P82987 1691 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 CCDC144AA2RUR9 1427 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 PRDM2Q13029 1718 aa2.65□□□□□ -1.99
BRCA1-229ENST00000621897 ARHGEF10O15013 1369 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 PLEKHG1Q9ULL1 1385 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 FAM240AA0A1B0GVK7 77 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 DAPL1A0PJW8 107 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF98A6NK75 572 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 CNMDO75829 334 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 MMP23AO75900 390 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 SOX14O95416 240 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 CRYZL1O95825 349 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 PTTG1O95997 202 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 APOC1P02654 83 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 C1GALT1C1LP0DN25 315 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 ADRB3P13945 408 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 AKR1C4P17516 323 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 AK4P27144 223 aaPredicted RBP2.64□□□□□ -1.99
BRCA1-229ENST00000621897 PYCR1P32322 319 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 RPS9P46781 194 aaKnown RBP2.64□□□□□ -1.99
BRCA1-229ENST00000621897 GPM6AP51674 278 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 TCL1AP56279 114 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 BTN3A2P78410 334 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 MRPS11P82912 194 aaKnown RBP2.64□□□□□ -1.99
BRCA1-229ENST00000621897 IL5RAQ01344 420 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF92Q03936 586 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 FMODQ06828 376 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 KCNJ11Q14654 390 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 LRRC75BQ2VPJ9 315 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 PARP15Q460N3 678 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 LIN52Q52LA3 116 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 TFDP3Q5H9I0 405 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 TNFAIP8L2Q6P589 184 aaPredicted RBP2.64□□□□□ -1.99
BRCA1-229ENST00000621897 C5orf46Q6UWT4 87 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 HSD17B13Q7Z5P4 300 aaPredicted RBP2.64□□□□□ -1.99
BRCA1-229ENST00000621897 STX19Q8N4C7 294 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF561Q8N587 486 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 ARRDC1Q8N5I2 433 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF676Q8N7Q3 588 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 OR2Z1Q8NG97 314 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 OR10G3Q8NGC4 313 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 OR4C13Q8NGP0 309 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 Q8WTZ3 238 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 ASB13Q8WXK3 278 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 C11orf40Q8WZ69 217 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 UCN3Q969E3 161 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 MCHR1Q99705 422 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 RARRES2Q99969 163 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 C20orf144Q9BQM9 153 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 PECRQ9BY49 303 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 COA1Q9GZY4 146 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 MS4A6AQ9H2W1 248 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 MIXL1Q9H2W2 232 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 PTGES2Q9H7Z7 377 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 UGT1A8Q9HAW9 530 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 EXOSC4Q9NPD3 245 aaKnown RBP2.64□□□□□ -1.99
BRCA1-229ENST00000621897 BIN3Q9NQY0 253 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 RBM22Q9NW64 420 aaKnown RBP eCLIP2.64□□□□□ -1.99
BRCA1-229ENST00000621897 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 RIMS3Q9UJD0 308 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 TRAPPC4Q9Y296 219 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 TMEM56-RWDD3S4R434 201 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 BRCA1P38398 1863 aaKnown RBP2.64□□□□□ -1.99
BRCA1-229ENST00000621897 PCDH11XQ9BZA7 1347 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF518AQ6AHZ1 1483 aa2.64□□□□□ -1.99
BRCA1-229ENST00000621897 VIRMAQ69YN4 1812 aaKnown RBP2.63□□□□□ -1.99
BRCA1-229ENST00000621897 RIMS1Q86UR5 1692 aaKnown RBP2.63□□□□□ -1.99
BRCA1-229ENST00000621897 RFPL4AA6NLU0 287 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 NCBP2LA6PVI3 153 aaKnown RBP2.63□□□□□ -1.99
BRCA1-229ENST00000621897 RFPL4AL1F8VTS6 287 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 BHLHE40O14503 412 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 CST8O60676 142 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 S1PR2O95136 353 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 KLF8O95600 359 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-229ENST00000621897 TTC4O95801 387 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 IFNA1P01562 189 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 HPNP05981 417 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 TFPTP0C1Z6 253 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 IFI30P13284 250 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 TAC1P20366 129 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 LINC00315P59091 139 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 TAS2R41P59536 307 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 KRTAP10-10P60014 251 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 PFN3P60673 137 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 SNAP25P60880 206 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 ESRRGP62508 458 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 ARG2P78540 354 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF45Q02386 682 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 PRSS8Q16651 343 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 SYT6Q5T7P8 510 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-229ENST00000621897 FAM231DQ6ZW35 169 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 FAM220AQ7Z4H9 259 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 GAPTQ8N292 157 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 UBL4BQ8N7F7 174 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 SLC26A10Q8NG04 563 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 OR10K1Q8NGX5 313 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 OR10R2Q8NGX6 335 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 ASB17Q8WXJ9 295 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 FGF14Q92915 247 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms