RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 OR10H4Q8NGA5 316 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 OTULINQ96BN8 352 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 IFT27Q9BW83 186 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 GON7Q9BXV9 100 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 FN3KRPQ9HA64 309 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 RNF7Q9UBF6 113 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 EXTL2Q9UBQ6 330 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 PLXNB1O43157 2135 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 TRAV38-1A0A0B4J264 116 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 ZNF816-ZNF321PA0A0X1KG74 233 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 FAM240BA0A1B0GVZ2 78 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 A0A1B0GWJ7 208 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 F5H5K5 113 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 INMT-MINDY4F8WBC2 141 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 LGALS8O00214 317 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 NDUFA2O43678 99 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 PPP1R3DO95685 299 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 OPN1MWP04001 364 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 FBP1P09467 338 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 OPN1MW2P0DN77 364 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 OPN1MW3P0DN78 364 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 PSKH1P11801 424 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 PAICSP22234 425 aaKnown RBP6.45□□□□□ -1.38
CLK1-215ENST00000621181 SDHAP31040 664 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 ATP6V1E1P36543 226 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 CD200P41217 278 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 TAS2R43P59537 309 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 RRAS2P62070 204 aaPredicted RBP6.45□□□□□ -1.38
CLK1-215ENST00000621181 MRPS15P82914 257 aaKnown RBP6.45□□□□□ -1.38
CLK1-215ENST00000621181 GK2Q14410 553 aaPredicted RBP6.45□□□□□ -1.38
CLK1-215ENST00000621181 MEP1BQ16820 701 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
CLK1-215ENST00000621181 HACD4Q5VWC8 232 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 CORO6Q6QEF8 472 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 Q6ZPA2 131 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 PGAP1Q75T13 922 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 UTS2BQ765I0 119 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 BTN2A1Q7KYR7 527 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 MRPL21Q7Z2W9 205 aaKnown RBP6.45□□□□□ -1.38
CLK1-215ENST00000621181 REC114Q7Z4M0 266 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 CEACAM19Q7Z692 300 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 C4orf36Q96KX1 117 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 TBX5Q99593 518 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 THAP7Q9BT49 309 aaPredicted RBP6.45□□□□□ -1.38
CLK1-215ENST00000621181 NMNAT2Q9BZQ4 307 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 SIRPDQ9H106 197 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 GHITMQ9H3K2 345 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 C16orf95Q9H693 158 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 VPREB3Q9UKI3 123 aa6.45□□□□□ -1.38
CLK1-215ENST00000621181 NOP16Q9Y3C1 178 aaKnown RBP6.45□□□□□ -1.38
CLK1-215ENST00000621181 CMYA5Q8N3K9 4069 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 A0A1B0GVI7 797 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 hCG_1807616A0A1W2PRN6 198 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 OOEPA6NGQ2 149 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 A6NLC8 198 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 RIIAD1A6NNX1 92 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ORC5O43913 435 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 GYPAP02724 150 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 UCHL1P09936 223 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 CA6P23280 308 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ACTC1P68032 377 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ACTA1P68133 377 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 BEAN1Q3B7T3 259 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 CDONQ4KMG0 1287 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ACSM3Q53FZ2 586 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ZNF684Q5T5D7 378 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 C6orf183Q5T699 404 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 GPR139Q6DWJ6 353 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 PYHIN1Q6K0P9 492 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 Q6ZTK2 550 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 VMO1Q7Z5L0 202 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 SYS1Q8N2H4 156 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 MS4A15Q8N5U1 240 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 SAMD12Q8N8I0 201 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 CYB561A3Q8NBI2 242 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 OR5H6Q8NGV6 325 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ZNRF4Q8WWF5 429 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ST8SIA4Q92187 359 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 GHSRQ92847 366 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 RFT1Q96AA3 541 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 PELI1Q96FA3 418 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ADAT1Q9BUB4 502 aaKnown RBP6.44□□□□□ -1.38
CLK1-215ENST00000621181 OR51V1Q9H2C8 321 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 CNTD2Q9H8S5 307 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ZNRD1Q9P1U0 126 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 ONECUT1Q9UBC0 465 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 LHFPL6Q9Y693 200 aa6.44□□□□□ -1.38
CLK1-215ENST00000621181 FAM25AB3EWG3 89 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 FAM25CB3EWG5 89 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 FAM25GB3EWG6 89 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 J3QLW9 94 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 DVL1O14640 695 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 IMPA2O14732 288 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 GSTZ1O43708 216 aaPredicted RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 ZNF780AO75290 641 aaPredicted RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 TSPAN9O75954 239 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 NDUFB2O95178 105 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 ECDO95905 644 aaPredicted RBP6.43□□□□□ -1.38
CLK1-215ENST00000621181 LCATP04180 440 aa6.43□□□□□ -1.38
CLK1-215ENST00000621181 MRPL3P09001 348 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms